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View Structure Prediction Details

Protein: ARR12_ARATH, ARR...
Organism: Arabidopsis thaliana
Length: 596 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARR12_ARATH, ARR....

Description E-value Query
Range
Subject
Range
gi|25365080 - gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
338.0 [0..1] [572..1]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK  60
   61 NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD PKYVMKGVTH GACDYLLKPV 120
  121 RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDPNNGKGNR KRKDQYNEDE 180
  181 DEDRDDNDDS CAQKKQRVVW TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA 240
  241 SH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.30103
Match: 2oqrA
Description: No description for 2oqrA was found.

Predicted Domain #2
Region A:
Residues: [243-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQKFRLYLKR ISGVANQQAI MANSELHFMQ MNGLDGFHHR PIPVGSGQYH GGAPAMRSFP  60
   61 PNGILGRLNS SSGIGVRSLS SPPAGMFLQN QTDIGKFHHV SSLPLNHSDG GNILQGLPMP 120
  121 LEFDQLQTNN NKSRNMNSNK SIAGTSMAFP SFSTQQNSLI SAPNNNVVVL EGHPQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [418-596]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATPPGFPGHQ INKRLEHWSN AVSSSTHPPP PAHNSNSINH QFDVSPLPHS RPDPLEWNNV  60
   61 SSSYSIPFCD SANTLSSPAL DTTNPRAFCR NTDFDSNTNV QPGVFYGPST DAMALLSSSN 120
  121 PKEGFVVGQQ KLQSGGFMVA DAGSLDDIVN STMKQEQSQG DLSGGDLGYG GFSSLRTCI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle