YRC Public Data Repository - Protein Structure Prediction

Protein:	ARGO_ECOLI
Organism:	Escherichia coli
Length:	211 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARGO_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|76581979, gi\|... - gi\|76817506\|ref\|YP_336716.1\| LysE family protein [Burkholderia pseudomallei 1710b], gi\|76581979\|gb\|A...	159.0	[0..2]	[200..441]
gi\|67665704, gi\|... - gi\|67665704\|ref\|ZP_00462964.1\| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia HI2424]... gi\|67093808, gi\|... - gi\|67658720\|ref\|ZP_00456090.1\| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia AU 1054...	159.0	[0..4]	[200..249]
gi\|111617741, gi... - gi\|111617741\|ref\|ZP_01404769.1\| Lysine exporter protein (LYSE/YGGA) [Acidovorax avenae subsp. citrul...	152.0	[0..18]	[200..715]
gi\|34495643, gi\|... - gi\|34495643\|ref\|NP_899858.1\| homoserine/homoserine lactone efflux protein [Chromobacterium violaceum...	140.0	[0..2]	[198..3]
gi\|65319651 - gi\|65319651\|ref\|ZP_00392610.1\| COG1280: Putative threonine efflux protein [Bacillus anthracis str. A...	140.0	[0..1]	[202..20]
gi\|30020423, gi\|... - gi\|30020423\|ref\|NP_832054.1\| amino acid transporter LysE [Bacillus cereus ATCC 14579], gi\|29895974\|g... gi\|228673622, gi... - gi\|229109777\|ref\|ZP_04239362.1\| Homoserine/threonine efflux protein [Bacillus cereus Rock1-15], gi\|2... gi\|228632866, gi... - gi\|229150557\|ref\|ZP_04278772.1\| Homoserine/threonine efflux protein [Bacillus cereus m1550], gi\|2286... gi\|228638652, gi... - gi\|229144930\|ref\|ZP_04273327.1\| Homoserine/threonine efflux protein [Bacillus cereus BDRD-ST24], gi\|... gi\|228655809, gi... - gi\|229127732\|ref\|ZP_04256721.1\| Homoserine/threonine efflux protein [Bacillus cereus BDRD-Cer4], gi\|... gi\|218235872, gi... - gi\|218235872\|ref\|YP_002367038.1\| putative homoserine/threonine efflux protein [Bacillus cereus B4264...	140.0	[0..1]	[202..1]
gi\|254737381 - gi\|254737381\|ref\|ZP_05195085.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|49185203, gi\|... - gi\|49185203\|ref\|YP_028455.1\| homoserine/threonine efflux protein, putative [Bacillus anthracis str. ... gi\|254722340 - gi\|254722340\|ref\|ZP_05184128.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|47502798, gi\|... - gi\|47527650\|ref\|YP_018999.1\| homoserine/threonine efflux protein, putative [Bacillus anthracis str. ... gi\|229265739, gi... - gi\|229601331\|ref\|YP_002866693.1\| putative homoserine/threonine efflux protein [Bacillus anthracis st... gi\|30256991, gi\|... - gi\|30262360\|ref\|NP_844737.1\| homoserine/threonine efflux protein, putative [Bacillus anthracis str. ... gi\|227002455, gi... - gi\|227814834\|ref\|YP_002814843.1\| putative homoserine/threonine efflux protein [Bacillus anthracis st... gi\|254760215 - gi\|254760215\|ref\|ZP_05212239.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|254751696 - gi\|254751696\|ref\|ZP_05203733.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|190565699, gi... - gi\|190565699\|ref\|ZP_03018619.1\| putative homoserine/threonine efflux protein [Bacillus anthracis Tsi... gi\|172084637, gi... - gi\|177649563\|ref\|ZP_02932565.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|170128452, gi... - gi\|170706721\|ref\|ZP_02897180.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|167639683, gi... - gi\|167639683\|ref\|ZP_02397953.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|165870620, gi... - gi\|165870620\|ref\|ZP_02215274.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str...	138.0	[0..1]	[202..1]
gi\|49477632, gi\|... - gi\|49477632\|ref\|YP_036458.1\| homoserine/threonine efflux protein [Bacillus thuringiensis serovar kon... gi\|218903490, gi... - gi\|218903490\|ref\|YP_002451324.1\| putative homoserine/threonine efflux protein [Bacillus cereus AH820... gi\|196029173, gi... - gi\|196039914\|ref\|ZP_03107217.1\| putative homoserine/threonine efflux protein [Bacillus cereus NVH059...	138.0	[0..1]	[202..1]
gi\|83648725, gi\|... - gi\|83648725\|ref\|YP_437160.1\| putative threonine efflux protein [Hahella chejuensis KCTC 2396], gi\|83...	138.0	[0..2]	[203..5]
gi\|89152072, gi\|... - gi\|89199797\|ref\|ZP_01178554.1\| Lysine exporter protein (LYSE/YGGA) [Bacillus cereus subsp. cytotoxis...	138.0	[0..3]	[202..2]

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Predicted Domain #1

Region A:
Residues: [1-211]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSYYFQGLA LGAAMILPLG PQNAFVMNQG IRRQYHIMIA LLCAISDLVL ICAGIFGGSA  60
   61 LLMQSPWLLA LVTWGGVAFL LWYGFGAFKT AMSSNIELAS AEVMKQGRWK IIATMLAVTW 120
  121 LNPHVYLDTF VVLGSLGGQL DVEPKRWFAL GTISASFLWF FGLALLAAWL APRLRTAKAQ 180
  181 RIINLVVGCV MWFIALQLAR DGIAHAQALF S

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	75.086186
Match:	PF01810.9
Description:	No description for PF01810.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits