YRC Public Data Repository - Protein Structure Prediction

Protein:	AIS_ECOLI
Organism:	Escherichia coli
Length:	200 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIS_ECOLI.

Description	E-value	Query Range	Subject Range
AIS_ECO24 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O139:H28 (strain E2437... gi\|191166478, gi... - gi\|191166478\|ref\|ZP_03028308.1\| phosphoglycerate mutase family protein [Escherichia coli B7A], gi\|19... AIS_ECO55 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli (strain 55989 / EAEC) ... AIS_ECO8A - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O8 (strain IAI1) GN=ai... AIS_ECOSE - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli (strain SE11) GN=ais P... gi\|194433370, gi... - gi\|194433370\|ref\|ZP_03065650.1\| phosphoglycerate mutase family protein [Shigella dysenteriae 1012], ... AIS_SHISS - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Shigella sonnei (strain Ss046) GN=ais P... gi\|194414768, gi... - gi\|194427147\|ref\|ZP_03059698.1\| phosphoglycerate mutase family protein [Escherichia coli B171], gi\|1... gi\|193068270, gi... - gi\|193068270\|ref\|ZP_03049234.1\| phosphoglycerate mutase family protein [Escherichia coli E110019], g... gi\|193062348, gi... - gi\|193062348\|ref\|ZP_03043443.1\| phosphoglycerate mutase family protein [Escherichia coli E22], gi\|19...	164.0	[0..1]	[200..1]
AIS_ECOK1 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O1:K1 / APEC GN=ais PE... AIS_ECOL6 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O6:H1 (strain CFT073 /... gi\|227835661, gi... - gi\|227887311\|ref\|ZP_04005116.1\| Ais protein [Escherichia coli 83972], gi\|227835661\|gb\|EEJ46127.1\| Ai... sp\|B7UFR4\|AIS_ECO27 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O127:H6 (strain E2348/... AIS_ECO27 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O127:H6 (strain E2348/... gi\|237704730, gi... - gi\|237704730\|ref\|ZP_04535211.1\| ais protein [Escherichia sp. 3_2_53FAA], gi\|226901096\|gb\|EEH87355.1\|... AIS_ECO45 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O45:K1 (strain S88 / E... AIS_ECOUT - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli (strain UTI89 / UPEC) ... AIS_ECO81 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O81 (strain ED1a) GN=a... AIS_ECOL6 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O6 GN=ais PE=3 SV=2	164.0	[0..1]	[200..1]
gi\|15832394, gi\|... - gi\|15832394\|ref\|NP_311167.1\| aluminum-inducible protein [Escherichia coli O157:H7 str. Sakai], gi\|13... gi\|189368332, gi... - gi\|189368332\|gb\|EDU86748.1\| phosphoglycerate mutase family protein [Escherichia coli O157:H7 str. EC... AIS_ECO57 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O157:H7 GN=ais PE=3 SV... gi\|209765378, gi... - pir\|\|C85865 protein induced by aluminum [imported] - Escherichia coli (strain O157:H7, substrain ED... gi\|12516595, gi\|... - gi\|15802801\|ref\|NP_288828.1\| protein induced by aluminum [Escherichia coli O157:H7 EDL933], gi\|12516... gi\|217327449, gi... - gi\|217327449\|ref\|ZP_03443532.1\| phosphoglycerate mutase family protein [Escherichia coli O157:H7 str... gi\|189378949, gi... - gi\|189378949\|gb\|EDU97365.1\| phosphoglycerate mutase family protein [Escherichia coli O157:H7 str. EC... gi\|168787162, gi... - gi\|189372877\|gb\|EDU91293.1\| phosphoglycerate mutase family protein [Escherichia coli O157:H7 str. EC...	163.0	[0..1]	[200..1]
gi\|191170154, gi... - gi\|191170154\|ref\|ZP_03031708.1\| phosphoglycerate mutase family protein [Escherichia coli F11], gi\|19... AIS_ECOL5 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Escherichia coli O6:K15:H31 (strain 536...	163.0	[0..1]	[200..1]
gi\|91073120, gi\|... - gi\|91211546\|ref\|YP_541532.1\| Ais protein [Escherichia coli UTI89], gi\|91073120\|gb\|ABE08001.1\| Ais pr...	162.0	[0..1]	[200..10]
gi\|26109045, gi\|... - gi\|26248640\|ref\|NP_754680.1\| Ais protein [Escherichia coli CFT073], gi\|26109045\|gb\|AAN81248.1\|AE0167...	162.0	[0..1]	[200..10]
gi\|110806219, gi... - gi\|110806219\|ref\|YP_689739.1\| protein induced by aluminum [Shigella flexneri 5 str. 8401], gi\|110615...	162.0	[0..1]	[200..20]
AIS_SALPB - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Salmonella paratyphi B (strain ATCC BAA... AIS_SALPB - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Salmonella paratyphi B (strain ATCC BAA... lcl\|NC_016856.1_... - [gene=ais] [protein=aluminum-inducible protein] [protein_id=YP_005238369.1] [location=complement(245... AIS_SALTY - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Salmonella typhimurium GN=ais PE=2 SV=1 AIS_SALEP - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Salmonella enteritidis PT4 (strain P125... AIS_SALDC - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Salmonella dublin (strain CT_02021853) ... AIS_SALTY - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Salmonella typhimurium (strain LT2 / SG... AIS_SALG2 - Lipopolysaccharide core heptose(II)-phosphate phosphatase OS=Salmonella gallinarum (strain 287/91 / ... gi\|167992631, gi... - gi\|205329168\|gb\|EDZ15932.1\| aluminum-inducible protein [Salmonella enterica subsp. enterica serovar ... gi\|197240814, gi... - gi\|197262559\|ref\|ZP_03162633.1\| aluminum-inducible protein [Salmonella enterica subsp. enterica sero...	161.0	[0..1]	[198..1]
gi\|75512728 - gi\|75512728\|ref\|ZP_00735230.1\| hypothetical protein Ecol5_01003120 [Escherichia coli 53638]	161.0	[0..1]	[200..20]
gi\|929575 - gi\|929575\|emb\|CAA58754.1\| ais [Escherichia coli]	159.0	[0..1]	[200..1]

Back

Predicted Domain #1

Region A:
Residues: [1-200]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAFCRSSLK SKKYIIILLA LAAIAGLGTH AAWSSNGLPR IDNKTLARLA QQHPVVVLFR  60
   61 HAERCDRSTN QCLSDKTGIT VKGTQDAREL GNAFSADIPD FDLYSSNTVR TIQSATWFSA 120
  121 GKKLTVDKRL LQCGNEIYSA IKDLQSKAPD KNIVIFTHNH CLTYIAKDKR DATFKPDYLD 180
  181 GLVMHVEKGK VYLDGEFVNH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.0
Match:	1h2eA
Description:	Broad specificity phosphatase PhoE (YhfR)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.84708627579827	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: