Protein: | AG43_ECOLI |
Organism: | Escherichia coli |
Length: | 1039 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AG43_ECOLI.
Description | E-value | Query Range |
Subject Range |
|
368.0 | [0..1] | [1039..1] |
|
366.0 | [0..1] | [1039..53] |
|
356.0 | [0..1] | [1039..3] |
|
354.0 | [0..1] | [1039..53] |
|
354.0 | [0..1] | [1039..1] |
|
354.0 | [0..1] | [1039..3] |
|
354.0 | [0..1] | [1039..3] |
Region A: Residues: [1-177] |
1 11 21 31 41 51 | | | | | | 1 MKRHLNTCYR LVWNHMTGAF VVASELARAR GKRGGVAVAL SLAAVTSLPV LAADIVVHPG 60 61 ETVNGGTLAN HDNQIVFGTT NGMTISTGLE YGPDNEANTG GQWVQDGGTA NKTTVTSGGL 120 121 QRVNPGGSVS DTVISAGGGQ SLQGRAVNTT LNGGEQWMHE GAIATGTVIN DKGWQVV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [178-383] |
1 11 21 31 41 51 | | | | | | 1 KPGTVATDTV VNTGAEGGPD AENGDTGQFV RGDAVRTTIN KNGRQIVRAE GTANTTVVYA 60 61 GGDQTVHGHA LDTTLNGGYQ YVHNGGTASD TVVNSDGWQI VKNGGVAGNT TVNQKGRLQV 120 121 DAGGTATNVT LKQGGALVTS TAATVTGINR LGAFSVVEGK ADNVVLENGG RLDVLTGHTA 180 181 TNTRVDDGGT LDVRNGGTAT TVSMGN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [384-474] |
1 11 21 31 41 51 | | | | | | 1 GGVLLADSGA AVSGTRSDGK AFSIGGGQAD ALMLEKGSSF TLNAGDTATD TTVNGGLFTA 60 61 RGGTLAGTTT LNNGAILTLS GKTVNNDTLT I |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [475-559] |
1 11 21 31 41 51 | | | | | | 1 REGDALLQGG SLTGNGSVEK SGSGTLTVSN TTLTQKAVNL NEGTLTLNDS TVTTDVIAQR 60 61 GTALKLTGST VLNGAIDPTN VTLAS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [560-721] |
1 11 21 31 41 51 | | | | | | 1 GATWNIPDNA TVQSVVDDLS HAGQIHFTST RTGKFVPATL KVKNLNGQNG TISLRVRPDM 60 61 AQNNADRLVI DGGRATGKTI LNLVNAGNSA SGLATSGKGI QVVEAINGAT TEEGAFVQGN 120 121 RLQAGAFNYS LNRDSDESWY LRSENAYRAE VPLYASMLTQ AM |
Detection Method: | |
Confidence: | 5.744727 |
Match: | PF03212.5 |
Description: | No description for PF03212.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [722-1039] |
1 11 21 31 41 51 | | | | | | 1 DYDRIVAGSR SHQTGVNGEN NSVRLSIQGG HLGHDNNGGI ARGATPESSG SYGFVRLEGD 60 61 LMRTEVAGMS VTAGVYGAAG HSSVDVKDDD GSRAGTVRDD AGSLGGYLNL VHTSSGLWAD 120 121 IVAQGTRHSM KASSDNNDFR ARGWGWLGSL ETGLPFSITD NLMLEPQLQY TWQGLSLDDG 180 181 KDNAGYVKFG HGSAQHVRAG FRLGSHNDMT FGEGTSSRAP LRDSAKHSVS ELPVNWWVQP 240 241 SVIRTFSSRG DMRVGTSTAG SGMTFSPSQN GTSLDLQAGL EARVRENITL GVQAGYAHSV 300 301 SGSSAEGYNG QATLNVTF |
Detection Method: | |
Confidence: | 4.53 |
Match: | 1uynX |
Description: | Translocator domain of autotransporter NalP from Neisseria meningitidis |
Matching Structure (courtesy of the PDB): |