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View Structure Prediction Details

Protein: ADF_VITVI
Organism: Vitis vinifera
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADF_VITVI.

Description E-value Query
Range		 Subject
Range
gi|48374972 - gi|48374972|gb|AAT42170.1| putative actin depolymerizing factor [Sorghum bicolor]
 178.0 [0..7] [142..327]
gi|21554405 - gi|21554405|gb|AAM63510.1| Actin-depolymerizing factor ADF-6 [Arabidopsis thaliana]
 172.0 [0..1] [143..1]
gi|68166241 - gi|68166241|gb|AAY88048.1| actin depolymerizing factor [Gossypium hirsutum]
 167.0 [0..7] [143..3]
ADF1_PETHY - Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1
 167.0 [0..7] [143..3]
gi|84028521 - gi|84028521|gb|ABC49719.1| actin depolymerizing factor-like protein [Arachis hypogaea]
 166.0 [0..7] [143..3]
gi|106879609 - gi|106879609|emb|CAJ38388.1| actin-depolymerizing factor [Plantago major]
 166.0 [0..7] [143..3]

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Predicted Domain #1
Region A:
Residues: [1-143] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRGLNASS GMGVADHSKN TFLELKRKKV HRYVIFKIDE KKKEVVVEKT GGPAESFDEF  60
   61 AAALPENDCR YAVYDFDFVT SENCQKSKIF FIAWSPDSSR IRAKMLYATS KERFRRELDG 120
  121 VHYEIQATDP TEMDLEVLRE RAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.30103
Match: 1f7sA
Description: Cofilin (actin depolymerizing factor, ADF)
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle