YRC Public Data Repository - Protein Structure Prediction

Protein:	ACPT_ECOLI
Organism:	Escherichia coli
Length:	195 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACPT_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|227839500, gi... - gi\|227883621\|ref\|ZP_04001426.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli 83972], gi\|... gi\|215266823, gi... - gi\|215488751\|ref\|YP_002331182.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli O127:H6 st... gi\|226902486, gi... - gi\|237703222\|ref\|ZP_04533703.1\| holo-(acyl carrier protein) synthase 2 [Escherichia sp. 3_2_53FAA], ... gi\|170680191, gi... - gi\|170680191\|ref\|YP_001745725.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli SMS-3-5],... gi\|91074539, gi\|... - gi\|91212965\|ref\|YP_542951.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli UTI89], gi\|910... gi\|218429324, gi... - gi\|218691760\|ref\|YP_002399972.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli ED1a], gi\|... gi\|110345309, gi... - gi\|110643717\|ref\|YP_671447.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli 536], gi\|1103... gi\|218367312, gi... - gi\|218560543\|ref\|YP_002393456.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli S88], gi\|2... gi\|26250090, gi\|... - gi\|26250090\|ref\|NP_756130.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli CFT073], gi\|26... gi\|115514876, gi... - gi\|117625752\|ref\|YP_859075.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli APEC O1], gi\|... gi\|218702220, gi... - gi\|218702220\|ref\|YP_002409849.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli IAI39], gi... gi\|190909367, gi... - gi\|75242728\|ref\|ZP_00726472.1\| COG2091: Phosphopantetheinyl transferase [Escherichia coli F11], gi\|1...	167.0	[0..1]	[195..1]
gi\|218353890, gi... - gi\|218697158\|ref\|YP_002404825.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli 55989], gi... ACPT_ECO57 - 4'-phosphopantetheinyl transferase AcpT OS=Escherichia coli O157:H7 GN=acpT PE=3 SV=1 gi\|195934987 - gi\|195934987\|ref\|ZP_03080369.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli O157:H7 str... gi\|208729473, gi... - gi\|208809672\|ref\|ZP_03252009.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 st... gi\|208812396, gi... - gi\|208812396\|ref\|ZP_03253725.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 st... gi\|208739188, gi... - gi\|208819065\|ref\|ZP_03259385.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 st... gi\|209158108, gi... - gi\|209396708\|ref\|YP_002272935.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 s... gi\|209914193, gi... - gi\|209920934\|ref\|YP_002295018.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli SE11], gi\|... gi\|217320601, gi... - gi\|217324380\|ref\|ZP_03440464.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 st... gi\|218362794, gi... - gi\|218556026\|ref\|YP_002388939.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli IAI1], gi\|... gi\|12518155, gi\|... - gi\|15804005\|ref\|NP_290041.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli O157:H7 EDL933... gi\|110616850, gi... - gi\|110807302\|ref\|YP_690822.1\| holo-(acyl carrier protein) synthase 2 [Shigella flexneri 5 str. 8401]... gi\|13363816, gi\|... - gi\|15833596\|ref\|NP_312369.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli O157:H7 str. S... gi\|254594812, gi... - gi\|254795412\|ref\|YP_003080249.1\| holo-(acyl carrier protein) synthase 2 [Escherichia coli O157:H7 st... gi\|189359041, gi... - gi\|189359041\|gb\|EDU77460.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 str. E... gi\|189369697, gi... - gi\|189369697\|gb\|EDU88113.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 str. E... gi\|168765856, gi... - gi\|189364465\|gb\|EDU82884.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 str. E... gi\|168772598, gi... - gi\|187771663\|gb\|EDU35507.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 str. E... gi\|189002259, gi... - gi\|189002259\|gb\|EDU71245.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 str. E... gi\|189374232, gi... - gi\|189374232\|gb\|EDU92648.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli O157:H7 str. E... gi\|191169760, gi... - gi\|191169760\|ref\|ZP_03031415.1\| 4'-phosphopantetheinyl transferase acpT [Escherichia coli B7A], gi\|1... gi\|157159328, gi... - gi\|75188247\|ref\|ZP_00701514.1\| COG2091: Phosphopantetheinyl transferase [Escherichia coli E24377A], ... gi\|75211840, gi\|... - gi\|75211840\|ref\|ZP_00711904.1\| COG2091: Phosphopantetheinyl transferase [Escherichia coli B171], gi\|... gi\|194420508, gi... - gi\|83571600\|ref\|ZP_00923040.1\| COG2091: Phosphopantetheinyl transferase [Shigella dysenteriae 1012],... gi\|81247249, gi\|... - gi\|82545838\|ref\|YP_409785.1\| holo-(acyl carrier protein) synthase 2 [Shigella boydii Sb227], gi\|8124... gi\|209755898, gi... - pir\|\|F86017 probable phosphopantetheinyltransferase [imported] - Escherichia coli (strain O157:H7, s... gi\|193061776, gi... - gi\|75260238\|ref\|ZP_00731506.1\| COG2091: Phosphopantetheinyl transferase [Escherichia coli E22], gi\|1... gi\|74314075, gi\|... - gi\|74314075\|ref\|YP_312494.1\| holo-(acyl carrier protein) synthase 2 [Shigella sonnei Ss046], gi\|7385...	167.0	[0..1]	[195..1]
gi\|24114735, gi\|... - gi\|24114735\|ref\|NP_709245.1\| holo-(acyl carrier protein) synthase 2 [Shigella flexneri 2a str. 301],... gi\|30043510, gi\|... - gi\|30065248\|ref\|NP_839419.1\| holo-(acyl carrier protein) synthase 2 [Shigella flexneri 2a str. 2457T...	166.0	[0..1]	[195..1]
gi\|193068819, gi... - gi\|75237074\|ref\|ZP_00721130.1\| COG2091: Phosphopantetheinyl transferase [Escherichia coli E110019], ...	166.0	[0..1]	[195..1]
gi\|82778741, gi\|... - gi\|82778741\|ref\|YP_405090.1\| holo-(acyl carrier protein) synthase 2 [Shigella dysenteriae Sd197], gi...	165.0	[0..1]	[195..1]
gi\|23125156, gi\|... - gi\|23125156\|ref\|ZP_00107102.1\| COG2091: Phosphopantetheinyl transferase [Nostoc punctiforme PCC 7310...	163.0	[0..1]	[189..24]
gi\|58202740 - gi\|58202740\|gb\|AAW67221.1\| putative phosphopantetheinyl transferase [Nodularia spumigena NSOR10] gi\|65994097 - gi\|65994097\|gb\|AAY42632.1\| NhcS [Nodularia spumigena]	155.0	[0..1]	[189..24]
gi\|71670879, gi\|... - gi\|71676018\|ref\|ZP_00673761.1\| Phosphopantethiene-protein transferase [Trichodesmium erythraeum IMS1...	155.0	[0..6]	[193..32]
gi\|90310709, gi\|... - gi\|90408179\|ref\|ZP_01216347.1\| 4'-phosphopantetheinyl transferase superfamily protein [Psychromonas ...	153.0	[0..3]	[189..22]
gi\|67923905, gi\|... - gi\|67923905\|ref\|ZP_00517362.1\| Phosphopantethiene-protein transferase [Crocosphaera watsonii WH 8501...	153.0	[0..9]	[193..47]

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Predicted Domain #1

Region A:
Residues: [1-195]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRIVLGKVS TLSAAPLPPG LREQAPQGPR RERWLAGRAL LSHTLSPLPE IIYGEQGKPA  60
   61 FAPEMPLWFN LSHSGDDIAL LLSDEGEVGC DIEVIRPRAN WRWLANAVFS LGEHAEMDAV 120
  121 HPDQQLEMFW RIWTRKEAIV KQRGGSAWQI VSVDSTYHSS LSVSHCQLEN LSLAICTPTP 180
  181 FTLTADSVQW IDSVN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.69897
Match:	1qr0A
Description:	4'-Phosphopantetheinyl transferase SFP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.953339213172222	bayes_pls_golite062009
transferase activity	0.17804298348743	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.0354356597199104	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: