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View Structure Prediction Details

Protein: tbc-20
Organism: Caenorhabditis elegans
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-20.

Description E-value Query
Range
Subject
Range
gi|49119692 - gi|49119692|gb|AAH72576.1| Tbc1d10b protein [Mus musculus]
225.0 [0..5] [385..119]

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Predicted Domain #1
Region A:
Residues: [1-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSSFSEPNS PLKEVLVDKW QTASCSDLGE EYVKPGPLAR AKFNALRNKR EAIDRFLKKH  60
   61 RKEDLSLYID ELRDFAISPG GLVDDEFRAV IWPVLSANLV QNDDLDDVSS SYDSDFESAQ 120
  121 SDFDEEPAYE ESEELTLEDL KGHKEWNQVE LDVHRTLSRF PPNISDTHRD VLQTELIPLI 180
  181 VRVLSINPRF NYYQGFHDIC LTVLLVCGEV DALPVCSNLA KNGSFNNYLL KTLEKSVVRE 240
  241 LDLLYVILSR VDPSLEQVMR SVELGTMFGL SWPLTWFSHT LKQYQQIVRF FDVFLASSPL 300
  301 LPIYVSAAVV VFRRASILAC EREMPFLHRL LTEMPHELPI DTIIKDSVYL SKLMPPCLLK 360
  361 TKYTNEYRKI VSKPSKAAVK TIPRYALQFM FVAGTVGAAA SFFFFKQIHP M

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.39794
Match: 2qq8A
Description: No description for 2qq8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle