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View Structure Prediction Details

Protein: CE36611
Organism: Caenorhabditis elegans
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36611.

Description E-value Query
Range
Subject
Range
gi|73963897 - gi|73963897|ref|XP_868482.1| PREDICTED: similar to Protein C14orf130 isoform 5 [Canis familiaris]
225.0 [0..12] [356..7]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDKKEETPS IAPVLCGEEE EAVTLGEIVE TIDYLEDKAD VLFATQNPNV CTYAEGYKPR  60
   61 QTLFTCLTCT PAPEMAGVCY GCALNCHDGH IIVELYTKRK FKCDCGNSKF GEKKCALYED 120
  121 KDAKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.30103
Match: 2ysmA
Description: No description for 2ysmA was found.

Predicted Domain #2
Region A:
Residues: [126-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EYNMYNHNYN GKFCTCDVFY PDEDGGKELL QCEICEDWFH EEHMPFKDVN YYYEEIEANS  60
   61 DTILNRDIAS AVCLVCIKKL PFLMHMKSGK DVFCHSKLIA EETKPEPHAL CIEHFRAKLC 120
  121 KCADCVRVYE MADCEFLLDD EDDIATFDSE SRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 2f6jA
Description: No description for 2f6jA was found.

Predicted Domain #3
Region A:
Residues: [279-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVEENKTTED DEMREMVKQI GMDGAQHFYS EVHNFKRKLE DFLNTKAEGG RTIAASDIKT  60
   61 FFDALKEENL EKKRARYE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle