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View Structure Prediction Details

Protein: CE36358
Organism: Caenorhabditis elegans
Length: 582 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36358.

Description E-value Query
Range
Subject
Range
gi|194670361, gi... - gi|76626830|ref|XP_583200.2| PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2...
782.0 [0..18] [574..6]

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Predicted Domain #1
Region A:
Residues: [1-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVDPNLLTP YKNTGAANAS LRQISEDAFY VVNEVVMKRL GHVPILKGDF HLLPAKVQRF  60
   61 IAEKAELMRP RGIFICDGSQ HEADELIDKL IERGMLSKLE AYENNYICRT DPKDVARVES 120
  121 KTWMVTKNKY DTVTHTKEGV EPIMGHWLAP EDLATELDSR FPGCMAGRIM YVIPFSMGPV 180
  181 GGPLSKIGIQ LTDSNYVVLS MRIMTRVNND VWDALGNQDF VRCIHSVGLP RPVKQRVINH 240
  241 WPCNPERVLI AHRPPEREIW SFGSGYGGNS LLGKKCFALR IASNIAKDEG WMAEHMLIMG 300
  301 VTRPCGREHF IAAAFPSACG KTNLAMLEPT LPGWKVRCVG DDIAWMKFGE DGRLYAINPE 360
  361 AGFFGVAPGT SNKTNPMAVA TFQKNSIFTN VAETANGEYF WEGLEDEIAD KNVDITTWLG 420
  421 EKWHIGEPGV AAHPNSRFAA PANQCPIIHP DWESPQGVPI EAIIFGGRRP QGVPLIYETN 480
  481 SWEHGVFTGS CLKSEATAAA EFTGKTVMHD PMAMRPFMGY NFGKYLQHWL DLKTDSRKIF 540
  541 QNQFVPRWML KRRESRHCNY YTRFSRIISR LSNSFLFVLF FI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1khbA
Description: Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolysing)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoenolpyruvate carboxykinase activity 5.427657115096 bayes_pls_golite062009
phosphoenolpyruvate carboxykinase (ATP) activity 4.07297753409796 bayes_pls_golite062009
phosphoenolpyruvate carboxykinase (GTP) activity 3.22045404005498 bayes_pls_golite062009
catalytic activity 1.59551963655826 bayes_pls_golite062009
lyase activity 0.903636804009288 bayes_pls_golite062009
carbon-carbon lyase activity 0.63361553348301 bayes_pls_golite062009
carboxy-lyase activity 0.110170641189915 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle