YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: tag-96
Organism: Caenorhabditis elegans
Length: 422 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-96.

Description E-value Query
Range
Subject
Range
gi|114656936 - gi|114656936|ref|XP_001167133.1| PREDICTED: galactokinase 2 isoform 10 [Pan troglodytes]
310.0 [0..3] [421..41]

Back

Predicted Domain #1
Region A:
Residues: [1-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNEQLAEQ FVKLYGIEPE VRVTCPGRVN LIGEHIDYHD YGVFPMAIDA ATTILAAKND  60
   61 TNSIVFSNFD SKYESWSSPI PCPWKGCTSP KWFDYLLCGW RGIMNREDGQ EQFGMSFLLY 120
  121 GTIPPSSGLS SSSSLVCASA LATLSLIVDN DPFEHISRKD FAHLCIESEP LIGTLSGGMD 180
  181 QAAEVLASEG TALRIDFNPL RSKNIQLPSD AVFVVVHSNT ELNKGATSHY NERVIEGRIV 240
  241 AQIFKQKFNI TSGSFRLKEI QTLSGKSFKE ILKIVEELPD EVNKEQVIDL IGADKLEECL 300
  301 TENTRSFQKF KLRPRARHVF SEAYRVEQFE SACAQKNIQE MGRLMNESHR SCAIDYECSC 360
  361 RELDEICRLY LDHGALGARL TGAGWGGCAV VLMAADDVDR VVAELPSLFV SKPAQGIRLQ 420
  421 RF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.39794
Match: 2a2cA
Description: x-ray structure of human N-acetyl galactosamine kinase complexed with Mg-ADP and N-acetyl galactosamine 1-phosphate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle