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View Structure Prediction Details

Protein: ess-2
Organism: Caenorhabditis elegans
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ess-2.

Description E-value Query
Range
Subject
Range
ess-2 - status:Partially_confirmed UniProt:P34420 protein_id:AAA28021.1
436.0 [0..1] [531..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFDKNDER AQLMVPKSIN EGKVVKLSQK TLVTKKIERQ VVPEEKYIAG LDKIIEKDYF  60
   61 PHLKKMQAQK EYLEAVANKD INKIKELQMK FCS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGSVRTDRSF RTPITTRSTT EAPDVSSFDA DTPGPSSAST SSAHDWMQSP MPFANEEGDN  60
   61 EALNRKRKKK KEETLTSYLN KYTSEDNASF EELAKVMRER EDARRPWVYK AEEEHNKNLV 120
  121 TRQAIAAEAD VQLALKHAVD ADDNRPLNVD NWAYKAWNTV LFNPDGAALT PAEIADAARK 180
  181 QQTEINKRGT RFPDSGKLKP SDEAMTRAAV SHALANAGKV DFLGNE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [320-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTPANSFKLL ETPNPNPDDM DSPLMTWGEI DGTPFRLDAP DVTEHSLPGA APVFKIPEVP  60
   61 YREKIAQSMN DSIAAKYRDK RKVAMRAAEG AHFSRTPGFG SKRVSDKLAQ LSPAAQKLAT 120
  121 KKLGLKMLPA HKSPFASPKI MSNWSRPSSS KRSTTPGSAW SRGSTTPGSS WSQGAQTPGT 180
  181 PGIESMIRRK GDNVGPSTSA GAADRANAGD FF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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