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View Structure Prediction Details

Protein: CE36841
Organism: Caenorhabditis elegans
Length: 471 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36841.

Description E-value Query
Range
Subject
Range
CE09968 - status:Partially_confirmed UniProt:O16622 protein_id:AAB66090.1
318.0 [0..34] [245..29]

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Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFSGHLCYV HKDDNTISRG CLSVSDGAPE DDNCVNGFCE TENYCIKSWI VANGADCLNT  60
   61 RTDLSDRQCQ KNRRGLVSCI CNSDKCNDDS FTIPSDVVLT IPPVIKCFSQ DLIEDNYCFG 120
  121 HYCTYEQEYI RNDFGDAYTS INSPSRGCSD LEYAEDLNSP NMCRLLNGLL ECQCSTPYCN 180
  181 RDQPFE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.49485
Match: PF01064.14
Description: No description for PF01064.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [187-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPMGNTLCYY REGHVCVARI DKKVKELGCL SVSDGAPEES KTSATQINFY SVTCIDGYCE  60
   61 STS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [250-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YCMKTWILAN SQGCQETFAD LSELTCQTNR KGLVSCFCNT DKCNDDSFEI PTDVVLTVPP  60
   61 VMKCFEDDLN EDNYCYGHYC IYERDLTRNE FGDVFPRTAK PRRGCSDPNY TQDLSRKNMC 120
  121 KIENDWLQCI CDTEFCNREQ NIEVPLGNVI CYLSKRDQSE RTKYCIGQKC YLFYEDINNV 180
  181 KEKGCSSVND EAPEEEKRLG KLGYYTYCDE NLCNGDLLPS IE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.327902
Match: PF01064.14
Description: No description for PF01064.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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