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View Structure Prediction Details

Protein: set-11
Organism: Caenorhabditis elegans
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for set-11.

Description E-value Query
Range
Subject
Range
gi|20160708, gi|... - gi|34909174|ref|NP_915934.1| similar to SET1 [Oryza sativa (japonica cultivar-group)], gi|20160708|d...
280.0 [0..22] [361..371]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKISNPNLF CLPYFPHIFL SAETFFSRFL LRVTYQLLRP SQISFLFFFS IFYVFKMYVQ  60
   61 NVKDHITFAV FFWKFFFIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AFIFRTGNFG FPIIGKEWFT DVAKQQPMVL YEDISQGCER FVVPVYSNPR FFMDSSLFEN  60
   61 FKYTSRIIDV AGQLACRSAS PTFMCQCAGQ CSTNCECSSG VFGEGGTVEN MELLMWDTVR 120
  121 ECNEYCNCAL WCGNRVAQKG AMYPVEIFAR DPWCGWGVRA SVDIAFGTFI GEYAGELIDD 180
  181 EEAMDRHDST FLFETKVGSE TLTIDAKYSG NYTRFINHSC APNVKVANIS WDYDKIQLIH 240
  241 MCFFTDKAIR KGEELTIDYG EAWWANKKFP CLCKSSECRY QFGNDQRT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.154902
Match: 2igqA
Description: No description for 2igqA was found.

YRC Informatics Platform - Version 3.0
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