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View Structure Prediction Details

Protein: acn-1
Organism: Caenorhabditis elegans
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acn-1.

Description E-value Query
Range
Subject
Range
acn-1 - peptidase status:Confirmed UniProt:Q18581 protein_id:AAA98719.2
223.0 [0..180] [332..754]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFHILLLLL VGACLPVFTQ EIKPKPELLP ADEAPKDPEA VFSEGEPFEL TDALDTPKNG  60
   61 SVPVPEPEPK PEPEPEPEPK PEPEPSPTPE PEPAIKFDNI ESEDYGDVAE TAASTQP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1q1qA
Description: Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [118-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DELNTEVIEQ LVDTFLNTGS IASNKTNKGP VFANPVAQAL VNLTLNHFSS TTSHSSTGSA  60
   61 IPMKSIRLLL DGTEKELHSL CSEEIPKTRQ PGDGGNGLPS EDRVAFPGGE CVNGQECLLD 120
  121 SH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [240-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CNGTICVCND GLYTLEIGNT FNCVPGNPAD SGFGDGKGGL VIGLFNNEVT TPEPSAEPEP  60
   61 TAKTTTKMPP RVRAATSPFS LYLTVLLIIY FAL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle