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View Structure Prediction Details

Protein: CE36979
Organism: Caenorhabditis elegans
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36979.

Description E-value Query
Range
Subject
Range
CE36978 - status:Partially_confirmed UniProt:Q6A579 protein_id:AAT81207.1
542.0 [0..1] [419..140]

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Predicted Domain #1
Region A:
Residues: [1-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHEHRDEAL KDFRHHLRRG VTTTRYMKRF DNSAMFNLSM DAKCTLAEYV VYSRTGDRLV  60
   61 GFTDETEETD NLKEASTKKH VPTTTVRKMM DEAVVETFKN DTESIKTSRE GMCKEVDELN 120
  121 IPQRLEALES LVIDEAELFQ QVKDTHKQLS DRYNTIKNRV VSNDQMFTFY NSNSDLDQLA 180
  181 EIVKFFEVTQ ARADELRACA ECDVRMAQNH ENLLRQNRDK NGKMQKYCVK QREIVDDWAE 240
  241 RMKMVYVTCR DVVALQFRLD RYLKTLISHY RKRHMEKLLE SSELTQEAKT NVIDHNVTID 300
  301 ILTFSAKIKG FMDEVEKSLV VEPASQEYRD AFVSYMNDVR TQLGEYHWKA KLTQDKTLAE 360
  361 KDTLAALRTR IRQKEREVSN TSDEMKRMLK IYESLKEVDS LLAQREEISP AFQYALDSRE 420
  421 AEEEDEEAEE S

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.13
Match: 2bsgA
Description: The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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