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View Structure Prediction Details

Protein: egal-1
Organism: Caenorhabditis elegans
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egal-1.

Description E-value Query
Range
Subject
Range
gi|114764066, gi... - gi|114764066|ref|ZP_01443305.1| DNA polymerase I [Roseovarius sp. HTCC2601], gi|114543424|gb|EAU4643...
377.0 [0..2] [568..59]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEAKNMALL FFMDHLMQKN GRRTIHDLSC QFGARGFSEE MRNAVGTTQE GLTEFLQGHP  60
   61 SLFTVEGDQV ILNGHNDLNA KNNPLLQSGI RSRNYEKEAV DFFVTKLTKF GPELQIKSLL 120
  121 GHRSQAAPEV RLVSGRHLKE FCEFLQSQVD YFVVEGDRVR LKNMPEPDEN AIEMDDEGRP 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAGVKAKQAA VEYLKSVLEQ NEDQPIPLDQ FYQNFCQRFS HTIRQDVATN PKELLQFLKL  60
   61 NRGLFFIRSN KVSLVKNRLN EDGSENGSDE GEETNNNGMF PLDQSALTRI HFVKALKPAQ 120
  121 DLISRLWQDI NNMEKKVVGL DLKTVTVGVD GEIFLSLGVI ATTSQIGIFD LASSDVIILE 180
  181 SGFKGILESE KVVKVIHDAR RVASLLAHKY AVHMRNVFDT QVAHSLLQHE KFNKSLNEMR 240
  241 PISFINLQRV YYPQSIMLSD VTPRKMSMCP NWGVRPITEE FQLTIVEEAH CLLSALYQSL 300
  301 SNLIPVHLRG VFEDKCIEVL LASPNRPPPQ PFISSPYRAS TRRDVRNGGS IMQSFSPAPY 360
  361 AAAPRPQMSD ACTQTFSTGD IEVLNVFYE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.0
Match: 2hbjA
Description: No description for 2hbjA was found.

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on ester bonds 0.028552282641558 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle