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View Structure Prediction Details

Protein: tbc-6
Organism: Caenorhabditis elegans
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-6.

Description E-value Query
Range
Subject
Range
gi|109506156 - gi|109506156|ref|XP_001070749.1| PREDICTED: similar to USP6 N-terminal-like protein [Rattus norvegic...
273.0 [0..5] [329..111]

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Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVFNFYPIP RKSINFRSDV DDLGFLRPWS PQEESGCKKQ YEAWYSSYLP IVVRRRCRWE  60
   61 KENPRRNSHL LQRFVRKGIP HTFRKELWLR SCPSRADGVW QRHEVPDEVI KQIKLDLPRT 120
  121 FPDNKFLKTE GTRKTLGRAL FAVAEHIPSV GYCQGLNFVA GVILLVVNDE SRAIDLLVHL 180
  181 VSQRQEYYGK NMIGLRRDMH VLHSLLREHC PRVVVTLEKL DVGLDMLVGK WFVCWFVESL 240
  241 PMETVLRLWD CLIYEGDEWL FRIAVALFRS NMIAISSCES IDQLMTEVQN IGTSKAALYC 300
  301 HQLILKSAAL SITNKSIEAL RADAELAIPE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle