| Protein: | BUD4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1448 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [129..1448] | [1..1320] |
|
|
0.0 | [1..1448] | [1..1448] |
|
|
0.0 | [761..1426] | [65..699] |
|
|
0.0 | [1061..1423] | [1299..1646] |
|
|
2.0E-16 | [761..827] | [67..143] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MHDAESTVDS LLKEIDNEME QTKSNITQNG SEDTPHNWKL PLQEIGDDTM EMLVKHNTRS 60
61 NATENSRGRS PSKMSTISNE SLNLGLLRVN SELEESPAAV HQERIKNSVA NGALGHANSP 120
121 KVLNNLKNMA QDIDKLARDE EKPVKLSSSP LKFTLKSTQP LLSY
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-760] |
1 11 21 31 41 51
| | | | | |
1 PESPIHRSSI EIETNYDDED EEEEDAYTCL TQSPQILHSP SRIPITNAVS INKLNLDFTL 60
61 NPNESDKSLV SDTSVDSTGR ELDTKTIPEL PFCMSSTPEM TPVDEKCNLP SKLLNTSNNS 120
121 HSDSRSANSL CGGFKHFNES SRVLIPAKII QSLLMRMRLL KTMLCRDLQQ NMEHIDEAFD 180
181 EKKVLDEGCS NEPVTFLGEN DTRSIVYSNK GTNANVQEFS QEDSLAHSEP KFKDLNATSD 240
241 DVWNEDKETD ANISTSTKSE ESYIADYKVT RQEDWDTKKL HQESEHANEQ PAIIPQKDSS 300
301 EETFTELNNE SEFQRNFKDG EEYRIVQHEE SLYGQRTKSP EENIINGSEI GVDHGEAAEV 360
361 NEPLAKTSAE EHDLSSSCED QSVSEARNKD RIEEKEVETK DENIETEKDE SEYHKVEENE 420
421 EPEHVPLLPP LPRWEEIQFN EPFIDENDTS NDSIDLTRSM KPSDYISIWH IQEEEIKSNS 480
481 PESIANSQFS QQSSITTAST VDSKKDNGST SFKFKPRIVS RSRIYNPKSR VSSLNYYDNE 540
541 DYILSNSEWN ALDPMRRNTL ISKRIQDNIR TQKGHAPLIR PSIMKLNGED SGFQNH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [761-879] |
1 11 21 31 41 51
| | | | | |
1 FLEVEQPQEH ENIPLSTHLS EQDITTNVGL DEQKLPTNTQ DEAEISIREI ESAGDITFNR 60
61 GDLLSLSFDE ELGQDFANFL DALDHDSTSF NHGPDDSSSF QRDSSKKSFN SLWESSYEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [880-1261] |
1 11 21 31 41 51
| | | | | |
1 KPPPSIRKQP IAPDVLQKLL ESDTKDDADL EKIREERITE PRTGLGIGML KTPVKDVSIA 60
61 LAASIKGYEA SFSDTDSRPE GMNNSDAITL NMFDDFEEDK MTPSTPVRSI SPIKRHVSSP 120
121 FKVVKAGNKQ ENNEINIKAE EEIEPMTQQE TDGLKQDIPP LLAQTKDNVE AKEETITQLE 180
181 EPQDVEQEFP DMGTLYLSIK AISTLALYGT KSHRATYAIV FDNGENVVQT PWESLPYDGN 240
241 IRINKEFELP IDFKGKAETS SASSERDSYK KCVITLKCKY EKPRHELVEI VDKVPVGKSF 300
301 FGKTKYKFEK KYVQKKPKQD EWDYLFAQDG SFARCEIEIN EEFLKNVAFN TSHMHYNMIN 360
361 KWSRIADKIH GSKRLYELPR KA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1262-1448] |
1 11 21 31 41 51
| | | | | |
1 PHKVASLDVE ACFLERTSAF EQFPKQFSLV NKIVSKYKLQ QNIYKEGYLL QDGGDLKGKI 60
61 ENRFFKLHGS QLSGYHEISR KAKIDINLLK VTKVLRNEDI QADNGGQRNF TDWVLFNECF 120
121 QLVFDDGERI TFNAECSNEE KSDWYNKLQE VVELNVFHQP WVKKYCEKLA EEEKTRTTGH 180
181 NLKQDFN
|
| Detection Method: | |
| Confidence: | 12.251812 |
| Match: | PF00169 |
| Description: | PH domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [760-840] |
1 11 21 31 41 51
| | | | | |
1 HFLEVEQPQE HENIPLSTHL SEQDITTNVG LDEQKLPTNT QDEAEISIRE IESAGDITFN 60
61 RGDLLSLSFD EELGQDFANF L
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [841-1059] |
1 11 21 31 41 51
| | | | | |
1 DALDHDSTSF NHGPDDSSSF QRDSSKKSFN SLWESSYELK PPPSIRKQPI APDVLQKLLE 60
61 SDTKDDADLE KIREERITEP RTGLGIGMLK TPVKDVSIAL AASIKGYEAS FSDTDSRPEG 120
121 MNNSDAITLN MFDDFEEDKM TPSTPVRSIS PIKRHVSSPF KVVKAGNKQE NNEINIKAEE 180
181 EIEPMTQQET DGLKQDIPPL LAQTKDNVEA KEETITQLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1060-1156] |
1 11 21 31 41 51
| | | | | |
1 EPQDVEQEFP DMGTLYLSIK AISTLALYGT KSHRATYAIV FDNGENVVQT PWESLPYDGN 60
61 IRINKEFELP IDFKGKAETS SASSERDSYK KCVITLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1157-1257] |
1 11 21 31 41 51
| | | | | |
1 CKYEKPRHEL VEIVDKVPVG KSFFGKTKYK FEKKYVQKKP KQDEWDYLFA QDGSFARCEI 60
61 EINEEFLKNV AFNTSHMHYN MINKWSRIAD KIHGSKRLYE L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1258-1448] |
1 11 21 31 41 51
| | | | | |
1 PRKAPHKVAS LDVEACFLER TSAFEQFPKQ FSLVNKIVSK YKLQQNIYKE GYLLQDGGDL 60
61 KGKIENRFFK LHGSQLSGYH EISRKAKIDI NLLKVTKVLR NEDIQADNGG QRNFTDWVLF 120
121 NECFQLVFDD GERITFNAEC SNEEKSDWYN KLQEVVELNV FHQPWVKKYC EKLAEEEKTR 180
181 TTGHNLKQDF N
|
| Detection Method: | |
| Confidence: | 1.68 |
| Match: | 2dhiA |
| Description: | No description for 2dhiA was found. |
