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View Structure Prediction Details

Protein: YNL208W
Organism: Saccharomyces cerevisiae
Length: 199 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL208W.

Description E-value Query
Range
Subject
Range
YNL208W - Protein of unknown function; may interact with ribosomes, based on co-purification experiments; auth...
170.0 [0..1] [117..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANEFYSSG QQGQYNQQNN QERTGAPNNG QYGADNGNPN GERGLFSTIV GGSAGAYAGS  60
   61 KVSNNHSKLS GVLGAIGGAF LANKISDERK EHKQQEQYGN SNFGGAPQGG HNNHHRQDNN 120
  121 NNNGGFGGPG GPGGQGFGRQ GPQGFGGPGP QEFGGPGGQG FGGPNPQEFG GPGGQGFGGP 180
  181 NPQEFGGQGR QGFNGGSRW

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.5
Match: 1wckA
Description: Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle