| Protein: | SKG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 355 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKG1.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..2] | [355..3] |
|
|
365.0 | [0..1] | [234..1] |
|
|
237.0 | [0..1] | [355..1] |
|
|
170.0 | [0..3] | [355..4] |
|
|
149.0 | [0..1] | [107..1] |
|
|
74.0 | [0..1] | [315..1] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MTASTSVAVG CAVGIPVGVG IIIAVCFWFN LQKRYKREEQ DDRELERAIY DESGFVSFDN 60
61 FGPLRDSKDE AALASSELKN PDHTSGSSEG SAHPEEK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.672 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.672 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.637 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.637 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.583 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.560 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.542 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.484 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.484 | N/A | N/A | a.118.1 | ARM repeat |
|
Region A: Residues: [98-201] |
1 11 21 31 41 51
| | | | | |
1 DGKSRDQEKP LGKKNSKYYV PAYRRKINLL QVRNNNYGNN ARQKSVVDLP SINNSSNVSL 60
61 SSSQRHITKR QISVYDQMVP VISDEGPNFF ADPSSDTNTS NDQN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.360 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.328 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.309 | a.39.1 | EF-hand |
| View | Download | 0.309 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.303 | a.4.1 | Homeodomain-like |
| View | Download | 0.294 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.291 | a.239.1 | Description not found. |
| View | Download | 0.282 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.258 | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [202-277] |
1 11 21 31 41 51
| | | | | |
1 KASMIELKHN TRQSSNENLI RNLQNQDFGS YYPRRASSSF LNGNISNASF HTRNSSITSV 60
61 NKRDALEDVF ATPKSA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.537 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.506 | N/A | N/A | d.28.1 | Ribosomal protein S19 |
| View | Download | 0.492 | N/A | N/A | g.37.1 | C2H2 and C2HC zinc fingers |
| View | Download | 0.480 | N/A | N/A | d.28.1 | Ribosomal protein S19 |
| View | Download | 0.480 | N/A | N/A | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.480 | N/A | N/A | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.477 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.474 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.454 | N/A | N/A | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [278-355] |
1 11 21 31 41 51
| | | | | |
1 AQSQLPNTFD KDNEGMDADH SVKDSRSAIT DKDKDLYKLQ NNYDVGNIGE IAEEDQYENE 60
61 FTNYSQSKRE FIESLRPK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.261 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.261 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.209 | a.4.12 | TrpR-like |
| View | Download | 0.209 | a.4.1 | Homeodomain-like |
| View | Download | 0.209 | a.4.1 | Homeodomain-like |
| View | Download | 0.206 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.206 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.204 | a.39.1 | EF-hand |
