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View Structure Prediction Details

Protein: AIM27
Organism: Saccharomyces cerevisiae
Length: 282 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM27.

Description E-value Query
Range
Subject
Range
AIM27 - Member of a transmembrane complex required for efficient folding of proteins in the ER; required for...
380.0 [0..1] [244..1]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTINQHLQQL LFNRIDKTTS SIQQARAPQM LLDDQLKYWV LLPISIVMVL TGVLKQYIMT  60
   61 LITGSSANEA QPRVKLTEWQ YLQWAQLLIG NGGNLSSDAF AAKKEFLVKD LTEERHLAKA 120
  121 KQQDGSQAGE VPNPFNDPSM SNAMMNM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.634 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.514 N/A N/A a.24.17 Group V grass pollen allergen
View Download 0.479 N/A N/A a.2.7 tRNA-binding arm
View Download 0.435 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.422 N/A N/A a.118.8 TPR-like

Predicted Domain #2
Region A:
Residues: [148-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKGNMASFIP QTIIMWWVNH FFAGFILMQL PFPLTAKFKE MLQTGIICQD LDVRWVSSIS  60
   61 WYFISVLGLN PVYNLIGLND QDMGIQAGIG GPQGPQGPPQ SQVDKAMHAM ANDLTIIQHE 120
  121 TCLDNVEQRV LKQYM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.421 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.345 N/A N/A a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.340 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.298 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.275 N/A N/A a.74.1 Cyclin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle