| Protein: | PSP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 593 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSP2.
| Description | E-value | Query Range |
Subject Range |
|
|
575.0 | [0..16] | [593..1] |
|
|
402.0 | [0..7] | [540..2] |
|
|
243.0 | [0..303] | [592..127] |
|
|
239.0 | [0..303] | [592..127] |
|
|
239.0 | [0..303] | [592..127] |
|
|
237.0 | [0..303] | [592..127] |
|
|
234.0 | [0..303] | [592..127] |
|
|
226.0 | [0..1] | [296..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MGTNNTSNNN GTTKKMSLEE FLGNDTLGES VWDEEDINLD AISNTTNIDI LKQTKAGEHQ 60
61 RDGHQQHPHG GHGPMNRSRF SNAGP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.712 | a.283.1 | Description not found. |
| View | Download | 0.476 | a.2.3 | Chaperone J-domain |
| View | Download | 0.476 | a.2.3 | Chaperone J-domain |
| View | Download | 0.426 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.400 | a.7.10 | Description not found. |
| View | Download | 0.315 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.277 | a.77.1 | DEATH domain |
| View | Download | 0.276 | a.134.1 | Fungal elicitin |
|
Region A: Residues: [86-212] |
1 11 21 31 41 51
| | | | | |
1 FGGGSMGDFA NHHHPLQHQQ GPPYIVKFSD LPPRFSNFDI EDLFQAKFTK FIKFKLFWEI 60
61 NKNPSISTLK SGSIFDQNFK RDSKVAFVEL YTSRDMDKIL NYWTTPLKEI YHITTAPAEF 120
121 EDFKDYS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.664 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.664 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.632 | N/A | N/A | c.1.10 | Aldolase |
| View | Download | 0.623 | N/A | N/A | c.1.10 | Aldolase |
| View | Download | 0.604 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.604 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.603 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.603 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.588 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.581 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
|
Region A: Residues: [213-304] |
1 11 21 31 41 51
| | | | | |
1 TKVKLLTDPK DDAGKPFITK TQRSKSNPFG SAKPVDTQSK ILDIEEKMEN LHVEDTTTLR 60
61 ASLIPSSDSM ATTATGSKIT ILKKQTPTEE ES
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.607 | d.203.1 | DsrC, the gamma subunit of dissimilatory sulfite reductase |
| View | Download | 0.567 | a.4.1 | Homeodomain-like |
| View | Download | 0.443 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.443 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.429 | a.74.1 | Cyclin-like |
| View | Download | 0.429 | a.74.1 | Cyclin-like |
| View | Download | 0.426 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.377 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.344 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.336 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [305-593] |
1 11 21 31 41 51
| | | | | |
1 HSATPTPKPL SYSEVVERSV VNETSKKGTP LSKLDSPALE LQSKPDKSDE FKGGDEQGFE 60
61 KGGDDKAQLD VSNDKDKGSE TDVDKQFTFK NVEREHSMSR TKYNGNHNNN NGNFRGSNRY 120
121 RGGPNGSSYK GGHNNRGNRG GYRGGSSYNN NNNNTNDNNN NNNNSSSNNN NGSRYHDRQN 180
181 NEEGLTSDSS LDASGNKKND FTNSTSNTQQ YSIFKPASGF LGQGNNDSIR NNGRGNYNSS 240
241 GMNGGSRGRG FGRGRGFGRG AYNNRGSRGG RGSSGNYSNY NNRTTDMPL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
