YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FMP21
Organism: Saccharomyces cerevisiae
Length: 138 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FMP21.

Description E-value Query
Range
Subject
Range
FMP21 - Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...
189.0 [0..1] [119..1]

Back

Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCAIKSTGY RYPRTGALNL LRGRPFNMAT RKITTERIPG PPKLPREEQE EFERLQRIAT  60
   61 SQEA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [65-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDQYNAQATG DRTKESLNSP LLTKNDIGSF SPEFSKTIPE FEGDVNPKTG EVGGPKQDPL  60
   61 RHGDYSFNGR VTDF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.823909
Match: PF07896.3
Description: No description for PF07896.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle