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View Structure Prediction Details

Protein: SUS1
Organism: Saccharomyces cerevisiae
Length: 96 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUS1.

Description E-value Query
Range
Subject
Range
gi|50731850 - gi|50731850|ref|XP_418387.1| PREDICTED: similar to e(y)2 protein; DC6 protein; e(y)2 homolog; enhanc...
136.0 [0..6] [91..234]
gi|109087263 - gi|109087263|ref|XP_001087516.1| PREDICTED: similar to e(y)2 protein [Macaca mulatta]
125.0 [0..6] [91..60]
gi|114621341 - gi|114621341|ref|XP_001135431.1| PREDICTED: similar to DC6 [Pan troglodytes]
120.0 [0..6] [91..38]
SUS1_ARATH - Transcription and mRNA export factor SUS1 OS=Arabidopsis thaliana GN=SUS1 PE=3 SV=1
116.0 [0..4] [89..23]
ENY2_MOUSE - Transcription and mRNA export factor ENY2 OS=Mus musculus GN=Eny2 PE=1 SV=1
gi|149721612 - gi|149721612|ref|XP_001495477.1| PREDICTED: similar to mCG145920 isoform 1 [Equus caballus]
gi|109482159, gi... - gi|194474074|ref|NP_001124052.1| enhancer of yellow 2 homolog [Rattus norvegicus], gi|149066438|gb|E...
ENSMMUT000000085... - null, null
ENSCJAT00000012432 - null
ENY2 - enhancer of yellow 2 homolog (Drosophila)
gi|57095302, gi|... - gi|73974326|ref|XP_860311.1| PREDICTED: similar to e(y)2 protein isoform 5 [Canis familiaris], gi|73...
tr|M3XCF2|M3XCF2... - Transcription and mRNA export factor ENY2 OS=Felis catus GN=ENY2 PE=3 SV=1
ENSPTRT00000037945 - null
ENY2_BOVIN - Transcription and mRNA export factor ENY2 OS=Bos taurus GN=ENY2 PE=3 SV=1
gi|194035670, gi... - gi|194035676|ref|XP_001926701.1| PREDICTED: similar to mCG145920 [Sus scrofa], gi|194035670|ref|XP_0...
115.0 [0..6] [91..10]
ENY2_XENLA - Transcription and mRNA export factor ENY2 OS=Xenopus laevis GN=eny2 PE=3 SV=1
115.0 [0..6] [91..5]
SUS1_ASHGO - Transcription and mRNA export factor SUS1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC ...
SUS1_ASHGO - Protein SUS1 OS=Ashbya gossypii GN=SUS1 PE=3 SV=1
114.0 [0..4] [96..7]
sus1 - SAGA complex subunit Sus1
SUS1_SCHPO - Transcription and mRNA export factor sus1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=...
111.0 [0..1] [87..4]
gi|47207340 - gi|47207340|emb|CAF92801.1| unnamed protein product [Tetraodon nigroviridis]
110.0 [0..6] [91..5]
ENY2_DANRE - Transcription and mRNA export factor ENY2 OS=Danio rerio GN=eny2 PE=3 SV=1
109.0 [0..7] [91..6]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMDTAQLKS QIQQYLVESG NYELISNELK ARLLQEGWVD KVKDLTKSEM NINESTNFTQ  60
   61 ILSTVEPKAL EMVSDSTRET VLKQIREFLE EIVDTQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.940 d.56.1 GroEL-intermediate domain like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle