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View Structure Prediction Details

Protein: VMA9
Organism: Saccharomyces cerevisiae
Length: 73 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VMA9.

Description E-value Query
Range
Subject
Range
gi|151943816 - gi|151943816|gb|EDN62116.1| V-ATPase V0 sector subunit e [Saccharomyces cerevisiae YJM789]
gi|190406432 - gi|190406432|gb|EDV09699.1| vacuolar ATP synthase subunit e [Saccharomyces cerevisiae RM11-1a]
VA0E_YEAST - V-type proton ATPase subunit e OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA9 PE=1...
VMA9 - Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex; essential for vacuolar acidification; in...
5.0E-22 [1..73] [1..73]
VA0E_ASHGO - V-type proton ATPase subunit e OS=Ashbya gossypii GN=VMA9 PE=3 SV=1
VA0E_ASHGO - V-type proton ATPase subunit e OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL...
7.0E-20 [3..73] [2..72]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFYTVVGV FIVVSAMSVL FWIMAPKNNQ AVWRSTVILT LAMMFLMWAI TFLCQLHPLV  60
   61 APRRSDLRPE FAE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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