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View Structure Prediction Details

Protein: YBL113W-A
Organism: Saccharomyces cerevisiae
Length: 160 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBL113W-A.

Description E-value Query
Range
Subject
Range
YP20A_YEAST, YE1... - UPF0479 membrane protein YPL283W-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL28...
YGR296C-B, YER19... - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a...
gi|151942980 - gi|151942980|gb|EDN61324.1| conserved protein [Saccharomyces cerevisiae YJM789]
268.0 [0..1] [160..1]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF FVPVQKVLQH  60
   61 LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN CFSSSSNGQV PSIISLYLRV 120
  121 DLSPFYAKIF QISYRVPMIW LDVFQVFFVF LIISQHSLHS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.824 a.24.16 Nucleotidyltransferase substrate binding subunit/domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle