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View Structure Prediction Details

Protein: FLO8
Organism: Saccharomyces cerevisiae
Length: 141 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLO8.

Description E-value Query
Range
Subject
Range
gi|3645900, gi|6... - gi|6320955|ref|NP_011034.1| Transcription factor required for flocculation, diploid filamentous grow...
FLO8_YEAST - Transcriptional activator FLO8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLO8 PE=3...
4.0E-62 [1..141] [1..141]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-57 [1..141] [1..141]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYKVNSSYP DSIPPTEQPY MASQYKQDLQ SNIAMATNSE QQRQQQQQQQ QQQQQWINQP  60
   61 TAENSDLKEK MNCKNTLNEY IFDFLTKSSL KNTAAAFAQD AHLDRDKGQN PVDGPKSKEN 120
  121 NGNQNTFSKV VDTPQGFLYE W

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [62-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AENSDLKEKM NCKNTLNEYI FDFLTKSSLK NTAAAFAQDA HLDRDKGQNP VDGPKSKENN  60
   61 GNQNTFSKVV DTPQGFLYEW 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle