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View Structure Prediction Details

Protein: ARP3_ARATH
Organism: Arabidopsis thaliana
Length: 427 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|109489498 - gi|109489498|ref|XP_001076100.1| PREDICTED: similar to Actin, cytoplasmic 2 (Gamma-actin) [Rattus no...
520.0 [0..3] [421..311]

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Predicted Domain #1
Region A:
Residues: [1-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPTSRPAIV IDNGTGYTKM GFAGNVEPCF ILPTVVAVNE SFLNQSKSSS KATWQTQHNA  60
   61 GVAADLDFYI GDEALAKSRS SSTHNLHYPI EHGQVEDWDA MERYWQQCIF NYLRCDPEDH 120
  121 YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG 180
  181 DGATHVVPVA EGYVIGSCIK SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY 240
  241 CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND 300
  301 FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN 360
  361 ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF ASCRTKEEYE EYGASICRTN 420
  421 PVFKGMY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 1k8kA
Description: Actin-related protein 3, Arp3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lysine N-acetyltransferase activity 6.00435371802752 bayes_pls_golite062009
histone acetyltransferase activity 6.00435371802752 bayes_pls_golite062009
ATP-dependent 5'-3' DNA helicase activity 4.48403442393358 bayes_pls_golite062009
5'-3' DNA helicase activity 4.48403442393358 bayes_pls_golite062009
N-acetyltransferase activity 4.4623239863508 bayes_pls_golite062009
N-acyltransferase activity 4.17753709537507 bayes_pls_golite062009
acetyltransferase activity 3.85999832240402 bayes_pls_golite062009
actin binding 3.49917339467744 bayes_pls_golite062009
DNA helicase activity 3.48040623488385 bayes_pls_golite062009
acyltransferase activity 3.31611368687679 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 3.27955167799398 bayes_pls_golite062009
structural constituent of cytoskeleton 3.14961582364442 bayes_pls_golite062009
cytoskeletal protein binding 3.11425505645918 bayes_pls_golite062009
transferase activity, transferring acyl groups 3.10494259200141 bayes_pls_golite062009
myosin binding 2.53108346927043 bayes_pls_golite062009
kinase activity 2.39470546929151 bayes_pls_golite062009
structural molecule activity 2.37892721989886 bayes_pls_golite062009
carbohydrate kinase activity 2.33338276303563 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 2.28750451001371 bayes_pls_golite062009
ADP binding 2.25399944386472 bayes_pls_golite062009
binding 2.11855816699924 bayes_pls_golite062009
transcription regulator activity 2.09111975841662 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.06985477154666 bayes_pls_golite062009
actin filament binding 2.01821925799878 bayes_pls_golite062009
protein binding 2.00711904074672 bayes_pls_golite062009
nucleic acid binding 1.84294882554466 bayes_pls_golite062009
hexokinase activity 1.70516840340504 bayes_pls_golite062009
DNA binding 1.70014394990425 bayes_pls_golite062009
transcription activator activity 1.35676801272576 bayes_pls_golite062009
transporter activity 1.2883466875237 bayes_pls_golite062009
transferase activity 1.25544026047211 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 1.19428728049016 bayes_pls_golite062009
transcription factor activity 1.06678984888387 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.900931843471417 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.898645342556399 bayes_pls_golite062009
pyrophosphatase activity 0.875671218597808 bayes_pls_golite062009
DNA-dependent ATPase activity 0.866917783590327 bayes_pls_golite062009
glucose binding 0.81023419099138 bayes_pls_golite062009
substrate-specific transporter activity 0.796517590178929 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.78242344952806 bayes_pls_golite062009
protein transporter activity 0.780308299678282 bayes_pls_golite062009
ATPase activity 0.687771333492666 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.574998559133169 bayes_pls_golite062009
glucokinase activity 0.47468456642723 bayes_pls_golite062009
protein kinase activity 0.344796257628435 bayes_pls_golite062009
nucleosome binding 0.329990231856661 bayes_pls_golite062009
catalytic activity 0.296484721581333 bayes_pls_golite062009
glucuronosyltransferase activity 0.281824450653963 bayes_pls_golite062009
ATP-dependent DNA helicase activity 0.166787445046116 bayes_pls_golite062009
adenyl nucleotide binding 0.162883291947849 bayes_pls_golite062009
ATP binding 0.13613543261671 bayes_pls_golite062009
ligase activity 0.106704967795667 bayes_pls_golite062009
adenyl ribonucleotide binding 0.0977998908064818 bayes_pls_golite062009
chromatin binding 0.0489277194984092 bayes_pls_golite062009
unfolded protein binding 0.0304569608189402 bayes_pls_golite062009

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