YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ARP4A_ARATH
Organism: Arabidopsis thaliana
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP4A_ARATH.

Description E-value Query
Range
Subject
Range
ACT_COLSC - Actin OS=Coleochaete scutata PE=2 SV=1
214.0 [0..1] [143..1]

Back

Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGGDEVSAI VVDLGSHTCK AGYAGEDAPK AVFPSVVGAI DGNGMDIDDA ANTTEDAKES  60
   61 DKEKGKRKLY TGSQALNFRR DQMEILSPTK DGIVTDWDMV DNVWDHAFRN CLMIDPTEHP 120
  121 MLLAEPPLNS QQQREKSGFS TFYRC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.154902
Match: 1c0gA
Description: Actin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle