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View Structure Prediction Details

Protein: gi|5262220, gi|1...
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5262220, gi|1....

Description E-value Query
Range
Subject
Range
FOX1_ARATH - Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1
364.0 [0..1] [525..1]

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Predicted Domain #1
Region A:
Residues: [1-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEVVYVLLL VLLVSVSDAN ETKPNIENFL RCLRNRTNPK NPIAEAIYTH ENSTFASSYV  60
   61 SYTNNKRCLN PNDTKLIAIV AAKHESHVQA TVVCAKSNGI QIRIRSGGHD YEGLSFTSSV 120
  121 PFVILDMHDL RSITIDVFRK QAWVDAGATM GELYTKIAAA SKTLAFAGGV CPTLGAGGHI 180
  181 SGGGYGNLIR KYGISVDHVV DARIVDVNGN ILTGATLGRD LLWAIRGGGG ASFGVILSWK 240
  241 INLVDVPKTV TVFKVNKTLE QGVTDVLYKW QLVSSKLPQD LFLRAMPKPV NGVVPSEKTI 300
  301 AVVFYAQFLG SARRLMAIMN KNLPELGLKR EDCYEMSWIN TTTFWQNYPV GTSTSVLLDR 360
  361 PSGPAGAFYK SKSDYVKKPI PKEEMEKIWK AMLKFNNMWM QWNPYGGVMD KIPADATAFP 420
  421 HRKGNLFKIQ YFALWTDANA TYANLGLMRD IYHEMEPYVS SNPREAFLNY RDIDVGSNPS 480
  481 GETNLEEAKI YGSKYFLGNF KRLMEVKAKY DPENFFRFEQ SIPPASAM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.39794
Match: 2bvfA
Description: Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle