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View Structure Prediction Details

Protein: AROD4_ARATH
Organism: Arabidopsis thaliana
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AROD4_ARATH.

Description E-value Query
Range
Subject
Range
AROD5_ARATH - Arogenate dehydratase 5, chloroplastic OS=Arabidopsis thaliana GN=ADT5 PE=1 SV=1
392.0 [0..1] [423..4]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAATSCDLK FRSTDPTSRN KCFSHAIPKR VAVTCGYRSE SFSFPNGVSV SRSDWQSSCA  60
   61 ILSSKVASVE NTGGLADKIA AVNGHTNGSV NLGLVAVEST NGKLAPAQPL TITDLSPAPL 120
  121 H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.522879
Match: 2d8dA
Description: No description for 2d8dA was found.

Predicted functions:

Term Confidence Notes
chorismate mutase activity 3.78733095924257 bayes_pls_golite062009
catalytic activity 1.09506175640279 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [122-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSSLRVAYQG VPGAYSEAAA GKAYPNCDAI PCDQFDVAFQ AVELWIADRA VLPVENSLGG  60
   61 SIHRNYDLLL RHRLHIVGEV QIPVHHCLLA LPGVRTDCVS RVISHPQALA QTEHSLDVLT 120
  121 PHAAREAFHD TAAAAEYISA NDLHDTAAVA SARAAELYNL QILADGIQDD PGNVTRFLML 180
  181 AREPIIPRTD RPFKTSIVFA AQEHKGTSVL FKVLSAFAFR DISLTKIESR PHHNRPLRVV 240
  241 GDGSFGTSKN FEYMFYVDFE ASMAEPRAQN ALAEVQEYTS FLRVLGSYPM DMTPWSMTST 300
  301 EEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 2qmxA
Description: No description for 2qmxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle