YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DGAT1_ARATH
Organism: Arabidopsis thaliana
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DGAT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|7576941 - gi|7576941|gb|AAF64065.1|AF251794_1 putative diacylglycerol acyltransferase [Brassica napus]
669.0 [0..1] [520..1]

Back

Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILDSAGVT TVTENGGGEF VDLDRLRRRK SRSDSSNGLL LSGSDNNSPS DDVGAPADVR  60
   61 DRIDSVVNDD AQGTANLAGD NNGGGDNNGG GRGGGEGRGN ADATFTYRPS VPAHRRARES 120
  121 PLSSDAIFKQ SHAGLFNLCV VVLIAVNSRL IIENLMKYGW LIR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.976
Match: 2ao7A
Description: No description for 2ao7A was found.

Predicted Domain #2
Region A:
Residues: [164-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDFWFSSRSL RDWPLFMCCI SLSIFPLAAF TVEKLVLQKY ISEPVVIFLH IIITMTEVLY  60
   61 PVYVTLRCDS AFLSGVTLML LTCIVWLKLV S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [255-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YAHTSYDIRS LANAADKANP EVSYYVSLKS LAYFMVAPTL CYQPSYPR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [303-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SACIRKGWVA RQFAKLVIFT GFMGFIIEQY INPIVRNSKH PLKGDLLYAI ERVLKLSVPN  60
   61 LYVWLCMFYC FFHLWLNILA ELLCFGDREF YKDWWNAKSV GDYWRMWNMP VHKWMVRHIY 120
  121 FPCLRSKIPK TLAIIIAFLV SAVFHELCIA VPCRLFKLWA FLGIMFQVPL VFITNYLQER 180
  181 FGSTVGNMIF WFIFCIFGQP MCVLLYYHDL MNRKGSMS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle