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View Structure Prediction Details

Protein: CSE_ARATH
Organism: Arabidopsis thaliana
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSE_ARATH.

Description E-value Query
Range
Subject
Range
gi|78066438, gi|... - gi|78066438|ref|YP_369207.1| Alpha/beta hydrolase [Burkholderia sp. 383], gi|77967183|gb|ABB08563.1|...
183.0 [0..43] [318..3]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD  60
   61 GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL LGHGRSDGIR CYMGDMEKVA 120
  121 ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED 180
  181 MKPSKAHLFA YGLLFGLADT WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR 240
  241 ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL 300
  301 IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 1cqzA
Description: Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity 1.02824339321154 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.282381128231187 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 0.054530214464529 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.00303228391703936 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle