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View Structure Prediction Details

Protein: BRTL3_ARATH
Organism: Arabidopsis thaliana
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BRTL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|114674911 - gi|114674911|ref|XP_524071.2| PREDICTED: solute carrier family 25, member 23 [Pan troglodytes]
314.0 [0..99] [428..334]
gi|33598954 - gi|33598954|ref|NP_037518.2| solute carrier family 25 member 24 isoform 1 [Homo sapiens]
309.0 [0..99] [427..162]
gi|109012617 - gi|109012617|ref|XP_001083681.1| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 ...
308.0 [0..99] [427..143]
gi|109465464, gi... - gi|109467461|ref|XP_001072301.1| PREDICTED: similar to calcium-binding transporter [Rattus norvegicu...
307.0 [0..99] [427..171]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF  60
   61 LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF KSEKGSVLIG GGQESKEKRR 120
  121 VKEN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAGALNTTKH LWAGAFAAMV SRTCIAPLER MKLEYIVRGE QGNLLELIQR IATNEGIRGF  60
   61 WKGNLVNILR TAPFKSINFY AYDTYRGQLL KLSGNEETTN FERFVAGAAA GVTASLLCLP 120
  121 LDTIRTVMVA PGGEALGGVV GAFRHMIQTE GFFSLYKGLV PSLVSMAPSG AVFYGVYDIL 180
  181 KSAYLHTPEG KKRLEHMKQE GEELNAFDQL ELGPMRTLLY GAIAGACSEA ATYPFEVVRR 240
  241 RLQMQSHAKR LSAVATCVKI IEQGGVPALY AGLIPSLLQV LPSAAISYFV YEFMKVVLKV 300
  301 ESSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle