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View Structure Prediction Details

Protein: CADH1_ARATH
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CADH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|40795502 - gi|40795502|gb|AAR91477.1| thermostable alcohol dehydrogenase [Geobacillus sp. M10EXG]
354.0 [0..11] [352..1]

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Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSESVENE CMCWAARDPS GLLSPHTITR RSVTTDDVSL TITHCGVCYA DVIWSRNQHG  60
   61 DSKYPLVPGH EIAGIVTKVG PNVQRFKVGD HVGVGTYVNS CRECEYCNEG QEVNCAKGVF 120
  121 TFNGIDHDGS VTKGGYSSHI VVHERYCYKI PVDYPLESAA PLLCAGITVY APMMRHNMNQ 180
  181 PGKSLGVIGL GGLGHMAVKF GKAFGLSVTV FSTSISKKEE ALNLLGAENF VISSDHDQMK 240
  241 ALEKSLDFLV DTASGDHAFD PYMSLLKIAG TYVLVGFPSE IKISPANLNL GMRMLAGSVT 300
  301 GGTKITQQML DFCAAHKIYP NIEVIPIQKI NEALERVVKK DIKYRFVIDI KNSLK

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Detection Method: PSI-BLAST
Confidence: 81.30103
Match: 1yqdA
Description: Sinapyl Alcohol Dehydrogenase complexed with NADP+
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle