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View Structure Prediction Details

Protein: KHSE_ARATH
Organism: Arabidopsis thaliana
Length: 370 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KHSE_ARATH.

Description E-value Query
Range
Subject
Range
gi|39104572 - gi|39104572|dbj|BAC42512.2| putative homoserine kinase HSK [Arabidopsis thaliana]
257.0 [0..1] [370..1]

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Predicted Domain #1
Region A:
Residues: [1-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLCFQSPS KPISYFQPKS NPSPPLFAKV SVFRCRASVQ TLVAVEPEPV FVSVKTFAPA  60
   61 TVANLGPGFD FLGCAVDGLG DHVTLRVDPS VRAGEVSISE ITGTTTKLST NPLRNCAGIA 120
  121 AIATMKMLGI RSVGLSLDLH KGLPLGSGLG SSAASAAAAA VAVNEIFGRK LGSDQLVLAG 180
  181 LESEAKVSGY HADNIAPAIM GGFVLIRNYE PLDLKPLRFP SDKDLFFVLV SPDFEAPTKK 240
  241 MRAALPTEIP MVHHVWNSSQ AAALVAAVLE GDAVMLGKAL SSDKIVEPTR APLIPGMEAV 300
  301 KKAALEAGAF GCTISGAGPT AVAVIDSEEK GQVIGEKMVE AFWKVGHLKS VASVKKLDNV 360
  361 GARLVNSVSR 

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Detection Method: PSI-BLAST
Confidence: 37.39794
Match: 1fwkA
Description: Homoserine kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.836142537655721 bayes_pls_golite062009
structural constituent of ribosome 0.0246382239358082 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle