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View Structure Prediction Details

Protein: FBL12_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBL12_ARATH.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
220.0 [0..1] [387..190]

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Predicted Domain #1
Region A:
Residues: [1-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ  60
   61 CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG CTVLNDSSLD SLRYPGARLH 120
  121 TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL 180
  181 VSDFGIKALS QACLQLESVK ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG 240
  241 GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW 300
  301 NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL 360
  361 TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.0
Match: 1dfjI
Description: Ribonuclease inhibitor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ubiquitin-protein ligase activity 7.44972411254615 bayes_pls_golite062009
small conjugating protein ligase activity 7.15534507891224 bayes_pls_golite062009
acid-amino acid ligase activity 6.28297720668265 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 5.29850707355885 bayes_pls_golite062009
ligase activity 1.96305455500679 bayes_pls_golite062009
protein binding 1.74797200095236 bayes_pls_golite062009
binding 1.43286145836735 bayes_pls_golite062009
catalytic activity 0.143741655309638 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle