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View Structure Prediction Details

Protein: PTR38_ARATH
Organism: Arabidopsis thaliana
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR38_ARATH.

Description E-value Query
Range
Subject
Range
PTR1_ARATH - Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1
286.0 [0..3] [543..5]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSVSRDAE ALKSADSSTR RSGGRITFPF MIVTLFGLTL ATLGWLQNLI VYLIEEYNMK  60
   61 SIAAAKILNI FSGFTFMFPA IGAIAADSFF GTIPVILVSS FISLVGVVLL ALTTLFDSLR 120
  121 PQACETASKL CQAPTNIQLG VLYTAITLGC VGAGGLRFTL ATAGANQYEK TKDQGSFFNW 180
  181 FFFTWYLAAS ISATAIVYAE ENISWSFGFG LCVAANLLGL IVFISGKKFY KHDKPLGSPF 240
  241 TSLLRVIFAA IRKRKAVVST NEKDYHSESK KTPTKSFRFF NRAALKQDDE VNSDGTIHNQ 300
  301 WRLCSVQQVE DFKAVIRIIP LVLAILFLST PIAMQLGLTV LQGLVMDRRL GPHFKIPAGS 360
  361 LQVITLLSTC L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.045757
Match: 2gfpA
Description: No description for 2gfpA was found.

Predicted Domain #2
Region A:
Residues: [372-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FIIVNDRFLY PFYQKLTGKF PTPIQRVGIG HVFNILSMAV TAIVEAKRLK IVQKGHFLGS  60
   61 SSVADMSVLW LFPPLVIVGI GEAFHFPGNV ALCYQEFPES MRSTATSITS VLIGICFYTS 120
  121 TALIDLIQKT TAWLPDDINH GRVDNVYWIL VIGGVLNLGY FLVCSWFYKY RNLENADHEQ 180
  181 DANVSH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.53
Match: 2v8nA
Description: No description for 2v8nA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle