YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GAUT7_ARATH
Organism: Arabidopsis thaliana
Length: 619 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAUT7_ARATH.

Description E-value Query
Range
Subject
Range
GAUT1_ARATH - Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1
355.0 [0..109] [618..147]

Back

Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGGGGGGG GGGGKRRWKV LVIGVLVLVI LSMLVPLAFL LGLHNGFHSP GFVTVQPASS  60
   61 FESFTRINAT KHTQRDVSER VDEVLQKINP VLPKKSDINV GSRDVNATSG TDSKKRGLPV 120
  121 SPTVVANPSP ANKTKSEASY TGVQRKIVSG DETWRTCEVK YGSYCLWREE NKEPMKDAKV 180
  181 KQMKDQLFVA RAYYPSIAKM PSQSKLTRDM KQNIQEFERI LSESSQDADL PPQVDKKLQK 240
  241 MEAVIAKAKS FPVDCNNVDK KLRQILDLTE DEASFHMKQS VFLYQLAVQT MPKSLHCLSM 300
  301 RLTVEHFKSD SLEDPISEKF SDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.045757
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [324-619]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLLHFVIISD NILASSVVIN STVVHARDSK NFVFHVLTDE QNYFAMKQWF IRNPCKQSTV  60
   61 QVLNIEKLEL DDSDMKLSLS AEFRVSFPSG DLLASQQNRT HYLSLFSQSH YLLPKLFDKL 120
  121 EKVVILDDDV VVQRDLSPLW DLDMEGKVNG AVKSCTVRLG QLRSLKRGNF DTNACLWMSG 180
  181 LNVVDLARWR ALGVSETYQK YYKEMSSGDE SSEAIALQAS LLTFQDQVYA LDDKWALSGL 240
  241 GYDYYINAQA IKNAAILHYN GNMKPWLELG IPNYKNYWRR HLSREDRFLS DCNVNP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 1g9rA
Description: Galactosyltransferase LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle