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View Structure Prediction Details

Protein: ELP4_ARATH
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|66841022 - gi|66841022|emb|CAI79646.1| elongator component [Arabidopsis thaliana]
301.0 [0..1] [355..1]

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Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPNVRSSS SFSRNISVVS SPQIPGLKSG PNGTAFISSG IRDLDRILGG GYPLGSLVMV  60
   61 MEDPEAPHHM DLLRTYMSQG LVNNQPLLYA SPSKDPKGFL GTLPHPASSK EDKPTAPDPD 120
  121 QGESLRIAWQ YRKYLENQKN AIDDYSNDFD MRKPLERQFL SGRPIDCVSL LDSSDLSIAQ 180
  181 DHCATFLSKF PRNSSNIASI GRIAIQSFCS PLCEYSEKES DMLSFIRLLK SMLMVSNAVA 240
  241 IVTFPPSLLS PSSSKRLQHM ADTLLSIKAI PDGDKELEKL LTGYKDINGF LNIHKVARIN 300
  301 TQVPVILEAK TFSMSLKKRR FLALECLNQA PVDGSSGTSY GTSGSCSSKS GALDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.154902
Match: 1u9iA
Description: Crystal Structure of Circadian Clock Protein KaiC with Phosphorylation Sites
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle