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View Structure Prediction Details

Protein: gi|6522553, gi|1...
Organism: Arabidopsis thaliana
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6522553, gi|1....

Description E-value Query
Range
Subject
Range
gi|92898663 - gi|92898663|gb|ABE94283.1| SWAP/Surp; Ubiquitin [Medicago truncatula]
225.0 [0..10] [307..16]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDLFDFVGG GNYSAAMPPP ERLSVMIMNR VAQTQPDMVL QLPLGSQLTI PAKGITLKEL  60
   61 GVMKLTAQSS VRYGFDFWCG LWKRVYMNPL FQFLNPSDSR SDFYNGFTAA YSRVLKPSKK 120
  121 LKKFDACTAT VLEGFFHRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.154902
Match: 2e60A
Description: No description for 2e60A was found.

Predicted Domain #2
Region A:
Residues: [140-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLFKLEEGVE TAMIDLHGFV YGVDCFAHMA DDNYSAIMDP PERPSMMINQ LTQIQRNAPA  60
   61 PHEKCLKRSY NFPYAFGGGI SLKELDLMKK VVMKPQFKFM EPTNSVFGLY NVVVDAYSRV 120
  121 VKPSDDAYAS MGMMQTARPE EPEAKRQKFD ESALNPEGAV RRRHSRWQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.98
Match: 2e60A
Description: No description for 2e60A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle