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View Structure Prediction Details

Protein: CRR11_ARATH
Organism: Arabidopsis thaliana
Length: 304 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRR11_ARATH.

Description E-value Query
Range
Subject
Range
gi|51969740 - gi|51969740|dbj|BAD43562.1| putative protein [Arabidopsis thaliana]
286.0 [0..9] [242..21]
gi|18076583 - gi|18076583|emb|CAC84552.1| putative receptor-like serine-threonine protein kinase [Solanum tuberosu...
272.0 [0..31] [300..21]
gi|34393282, gi|... - gi|50938043|ref|XP_478549.1| putative serine/threonine kinase receptor precursor [Oryza sativa (japo...
262.0 [0..18] [300..21]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFYSLKQLL LLYIIIMALF SDLKLAKSSS PEYTNLIYKG CARQRLSDPS GLYSQALSAM  60
   61 YGLLVTQSTK TRFYKTTTG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTSQTSVTGL FQCRGDLSNN DCYNCVSRLP VLSGKLCGKT IAARVQLSGC YLLYEISGFA  60
   61 QISGMELLFK TCGKNNVAGT GFEQRRDTAF GVMQNGVVQG H

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.0
Match: PF01657.7
Description: No description for PF01657.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.852 N/A N/A d.240.1 Description not found.

Predicted Domain #3
Region A:
Residues: [181-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFYATTYESV YVLGQCEGDI GDSDCSGCIK NALQRAQVEC GSSISGQIYL HKCFVGYSFY  60
   61 PNGVPKRSSP YPSSGSSGSS SSSSSSGTTG KTVAIIVGGT AGVGFLVICL LFVKNLMKKK 120
  121 YDDY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.79588
Match: PF01657.7
Description: No description for PF01657.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.831 N/A N/A d.58.18 Regulatory domain in the aminoacid metabolism


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle