Protein: | MED4_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 426 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED4_ARATH.
Description | E-value | Query Range |
Subject Range |
|
381.0 | [0..1] | [408..1] |
|
292.0 | [0..1] | [426..2] |
|
257.0 | [0..52] | [358..2] |
|
245.0 | [0..60] | [358..1] |
|
242.0 | [0..60] | [358..1] |
|
234.0 | [0..60] | [358..1] |
Region A: Residues: [1-135] |
1 11 21 31 41 51 | | | | | | 1 MLQHQIVQSP ARLGLTGPGS PSVQNPTPTR HGHPTSSSSS QSQHQQIQQQ PNLLPSSTVA 60 61 AASSASASAA VSSSALLSLL PPLPRAQALL QQMAVLTSKL FDVSPNRAIW LSAFRGSLPS 120 121 FLSSHSLPPP PPLEN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.696 | a.118.8 | TPR-like |
View | Download | 0.534 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.523 | a.118.8 | TPR-like |
View | Download | 0.492 | a.118.8 | TPR-like |
View | Download | 0.461 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.443 | a.118.8 | TPR-like |
View | Download | 0.415 | a.118.8 | TPR-like |
View | Download | 0.345 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.327 | a.118.9 | ENTH/VHS domain |
View | Download | 0.325 | a.118.11 | Cytochrome c oxidase subunit E |
Region A: Residues: [136-327] |
1 11 21 31 41 51 | | | | | | 1 PSPSSTKEIL SQFNSLQTQL FEAVTELQEI LDLQDAKQKV AREIKSKDSS LLAFANKLKD 60 61 AERVLDMLVD DYSDYRKPKR SKIEEDDEDN DNESSSSSTT VSSQLKLKDI LAYAHKISYT 120 121 TFAPPEFGAG QAPLRGALPP APQDEQMRAS QLYTFADLDI GLPKTVENME KKVEALIEPP 180 181 PPPEAMDISA IH |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [328-426] |
1 11 21 31 41 51 | | | | | | 1 NLLPPNIAVP SGWKPGMPVE LPRDLPLPPP GWKPGDPVVL PPLESIAAPR AEDHQHMRPS 60 61 QGLHRPPDVI QVRAVQLDIL EDDDSSDYSS DDASSDDED |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.392 | d.298.1 | Description not found. |
View | Download | 0.300 | a.134.1 | Fungal elicitin |
View | Download | 0.262 | d.298.1 | Description not found. |
View | Download | 0.260 | d.330.1 | Description not found. |
View | Download | 0.249 | d.137.1 | Monooxygenase (hydroxylase) regulatory protein |