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View Structure Prediction Details

Protein: FBK21_ARATH
Organism: Arabidopsis thaliana
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBK21_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593470 - gi|21593470|gb|AAM65437.1| F-box protein ZEITLUPE/FKF/LKP/ADAGIO family [Arabidopsis thaliana]
293.0 [0..1] [478..1]

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Predicted Domain #1
Region A:
Residues: [1-57]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAESTRNSS PPSTSQSSSP IINLPDDHLL TILLLLPVDS ILSFSMTCKR YKSLACS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.84
Match: 2e31A
Description: No description for 2e31A was found.

Predicted Domain #2
Region A:
Residues: [58-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSLWEALCER EWGPTSVDAL KLSSLRDGFS WMLMFQRVYK MDSVCCHKIS DP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.09691
Match: 1x2jA
Description: Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [110-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDDDEESSSF PIPRASHSLN FVNDHLVLFG GGCQGGRHLD DTWTSYVDKS NQSILKWKKV  60
   61 KSGTPSGRFG HTCIVIGEYL LLFGGINDRG ERLNDTWIGQ VFCHEGLSWK LLNVGSLQRP 120
  121 RPPPRGAHSA CCIAEKKMVV HGGIGLNGVR LGDTWILELS EDFSSGTWHM VESPQLPPPR 180
  181 SGHTLTCIRE NQVVLFGGRG LGYDVLDDVW ILDIQEPCEE KWIQIFYDFQ DVPEYASLPR 240
  241 VGHSATLVLG GRILIYGGED SYRHRKDDFW VLDVKTIPSS GLKPQGLSLN GSSVWKKLDR 300
  301 ISYGPKSRSF HRACADCSGR FLYVFGGMVD GLLQPAASSG LRFDGELFMV ELVLGFSDLD 360
  361 HQQRPGKSM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.09691
Match: 1u6dX
Description: Crystal structure of the Kelch domain of human Keap1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle