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View Structure Prediction Details

Protein: ASPL1_ARATH
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASPL1_ARATH.

Description E-value Query
Range
Subject
Range
APA1_ARATH - Aspartic proteinase A1 OS=Arabidopsis thaliana GN=APA1 PE=1 SV=1
301.0 [0..5] [507..11]

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Predicted Domain #1
Region A:
Residues: [1-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRSAFLLF CVLFLATEET LASLFSSRLI HRFSDEGRAS IKTPSSSDSL PNKQSLEYYR  60
   61 LLAESDFRRQ RMNLGAKVQS LVPSEGSKTI SSGNDFGWLH YTWIDIGTPS VSFLVALDTG 120
  121 SNLLWIPCNC VQCAPLTSTY YSSLATKDLN EYNPSSSSTS KVFLCSHKLC DSASDCESPK 180
  181 EQCPYTVNYL SGNTSSSGLL VEDILHLTYN TNNRLMNGSS SVKARVVIGC GKKQSGDYLD 240
  241 GVAPDGLMGL GPAEISVPSF LSKAGLMRNS FSLCFDEEDS GRIYFGDMGP SIQQSTPFLQ 300
  301 LDNNKYSGYI VGVEACCIGN SCLKQTSFTT FIDSGQSFTY LPEEIYRKVA LEIDRHINAT 360
  361 SKNFEGVSWE YCYESSAEPK VPAIKLKFSH NNTFVIHKPL FVFQQSQGLV QFCLPISPSG 420
  421 QEGIGSIGQN YMRGYRMVFD RENMKLGWSP SKCQEDKIEP PQASPGSTSS PNPLPTDEQQ 480
  481 SRGGHAVSPA IAGKTPSKTP SSSSSYSFSS IMRLFNSLLL LHWLASLM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.69897
Match: 1qdmA
Description: (Pro)phytepsin; Plant acid proteinase, phytepsin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.01508543827677 bayes_pls_golite062009
hydrolase activity 0.77554493777157 bayes_pls_golite062009
peptidase activity 0.68518523369811 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.43925265235199 bayes_pls_golite062009
endopeptidase activity 0.43264884039584 bayes_pls_golite062009
aspartic-type endopeptidase activity 0.30585066730542 bayes_pls_golite062009
aspartic-type peptidase activity 0.30585066730542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle