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View Structure Prediction Details

Protein: ROGF7_ARATH
Organism: Arabidopsis thaliana
Length: 546 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ROGF7_ARATH.

Description E-value Query
Range
Subject
Range
ROGF5_ARATH - Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana GN=ROPGEF5 PE=2 SV=1
782.0 [0..13] [541..12]
gi|125572637, gi... - gi|56784047|dbj|BAD82675.1| hypothetical protein [Oryza sativa Japonica Group], gi|125572637|gb|EAZ1...
744.0 [0..34] [482..38]

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Predicted Domain #1
Region A:
Residues: [1-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK  60
   61 KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI SNAITNLCAT LFGQLWRLEP 120
  121 LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL 180
  181 DNMLLEILDS FEETEFWYVD QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ 240
  241 ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS 300
  301 DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA 360
  361 DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI GKSILESYSR VLESLAFNIV 420
  421 ARIDDLLFVD DLTRHSSDQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 180.0
Match: 2ntxA
Description: No description for 2ntxA was found.

Predicted Domain #2
Region A:
Residues: [440-546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPTTLGNNGN DAPKSIAVPV SNYTTPSYSP SKQELRSSIT VPPSPSRFKI PHSSSVKRVL  60
   61 TAYVTKNEPR LKNLPLERSS RSSSSERLSL EKCMKESLNV SNLDPGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle