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View Structure Prediction Details

Protein: gi|20259796, gi|...
Organism: Arabidopsis thaliana
Length: 524 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20259796, gi|....

Description E-value Query
Range
Subject
Range
gi|89075412, gi|... - gi|89075412|ref|ZP_01161829.1| putative surface antigen [Photobacterium sp. SKA34], gi|89048828|gb|E...
326.0 [0..5] [523..282]

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Predicted Domain #1
Region A:
Residues: [1-524]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA  60
   61 ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR QATTLQELLK ASKVANFNLQ 120
  121 ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK 180
  181 NIFGYGDIWD GSLAYGCDHS AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA 240
  241 LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL 300
  301 RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS 360
  361 GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG PNEPRREVQD DESGDTYERD 420
  421 FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR 480
  481 SSVGAGIVVP TSLFRMELNY CHILKKQEHD RAKSGFFMTF STSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.221849
Match: 2qdzA
Description: No description for 2qdzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle