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View Structure Prediction Details

Protein: FBL19_ARATH
Organism: Arabidopsis thaliana
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBL19_ARATH.

Description E-value Query
Range
Subject
Range
gi|50734604 - gi|50734604|ref|XP_426048.1| PREDICTED: similar to mKIAA0840 protein [Gallus gallus]
158.0 [0..10] [300..140]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL  60
   61 NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE GGLTEIRIRH CTERSLSYAA 120
  121 ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI 180
  181 LKRNLLPRLG PSLPTIVAPL DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD 240
  241 SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE 300
  301 E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle