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View Structure Prediction Details

Protein: gi|6911869, gi|1...
Organism: Arabidopsis thaliana
Length: 711 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|6911869, gi|1....

Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYGDRLKS TSINGVKLYN VSSAPNVPTW LNPKKQRALR KNPHYMQRVE LIQELKFETA  60
   61 TTRIKATPDG EYLIASGIYP PQVKVYELNQ LALKFERHLD SEIVDFEILD DDFSKLAFLC 120
  121 ADRSINLHAK YGKHHTLRIP RMGRDMTYDS WSCDLLCAAS SPDLYRINLE QGRFLSPLST 180
  181 QSPALNVVSR SNLHGLVACG GEDGAVEFFD MRMKSSAARI NAVTHGGDAA AEVTAIEFDD 240
  241 SEGLQVAVGS SAGKVFIYDL RTSTPIRVKD HMYESPILNI KWQRTLNTQQ PKLITTDKHI 300
  301 VRIWDPNTGE GMTSIEPTQG GINDICVFRG SGLMLLALDS SLIPSYF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 3emhA
Description: No description for 3emhA was found.

Predicted Domain #2
Region A:
Residues: [348-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPELGPAPKW CSPLENLTEE LEESAQTTIY DNYKFLAMED LEKLQLTHLI GTDLLKASMH  60
   61 GYFINYHLYK KALAVIEPFA FDDYLERRKQ EKLEEQRTQR ITKKRRLPKV NRDLAARLHG 120
  121 DESEEEN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [475-711]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTAEDGEATK KVLKKKKPIL TDEHFVDGRF GSMFQNPDFQ IDKDSYEYGV LHPVASSKKQ  60
   61 PSLLDEHFEA VSDDDENSDS DASQPSDDEA DDGDATRPSK KARTPKLYEV KDERHAAAYH 120
  121 NRTSLAKEDS LPMGERVKAI ENRRGNFGGS KDIKFGPGGS REFSFKARGS SKYKEDRDDE 180
  181 YEDGQRNKRR GVQSLGLKST NIRGGFRGRG GGGFRGRGGG GSRGKGGRGG GRGRGRQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle