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View Structure Prediction Details

Protein: gi|7594534, gi|1...
Organism: Arabidopsis thaliana
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7594534, gi|1....

Description E-value Query
Range
Subject
Range
NAC10_ORYSJ - NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1
184.0 [0..91] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDFKIFTFS FAQSKYLENI REKTLTEVST SDIELLRRNS QPFRRATPCS LTVDLQANSF  60
   61 TPKLQSYLMM MPGRNKRKER SWPEPQTQPQ SEIPSSSSSL AADNMSPPST IAYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPPGFKFMPN DKEVINCYLK PYSDGNTNVL LNVPIHRVNI YESNPQTLSG RNVATLTEDI  60
   61 GTQKWLPKRF KAGDGVVGNK RPLAYYVGKP SEGVKTDWLM QEYSLDHSSH NTTR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.154902
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle